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Query: ACL93476.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIAKPLTVVPGFDVWPGLLDISAQRALVEAVLAGAEQAPFSNYRTAYGKPMSVAMTALGSLGWTSDARGYRYVDRHPETGRPWPDMPPALLDLWTVLGDPETPPDSCLVNLYRDGARMGLHQDRDEADPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSSSLVPGGGRINLTLRRARTALast
1 -7.380sp|Q9P015|RM15_HUMAN 39S ribosomal protein L15, mitochondrial OS=Homo sapiens GN=MRPL15 PE=1 SV=1  ali   17  1...........................................................................................................LVPYYTDAKNRGYLADPAKFPEARLELARKYG----YILPDITKDEL---------KMLCTRKDPRQIFFGLAP-----------GWVVNMADKKI... 73
2 -6.220sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol-3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3  ali   10  3......................................................................................................SPWIVTMEFYGKNDTLGIFLERYCFRPSYQCPSMFCDTPMVHHIRRFVHGQGCVQIILKELDSPVPGYQHTLTYSWCRICKQVTPVVALSNESWSMSFAKYLE. 107
3 -6.130tr|E9PDH4|E9PDH4_HUMAN Uncharacterized protein OS=Homo sapiens GN=PIKFYVE PE=4 SV=1  ali   10  3......................................................................................................SPWIVTMEFYGKNDTLGIFLERYCFRPSYQCPSMFCDTPMVHHIRRFVHGQGCVQIILKELDSPVPGYQHTLTYSWCRICKQVTPVVALSNESWSMSFAKYLE. 107
4 -5.900sp|Q99853|FOXB1_HUMAN Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 PE=2 SV=3  ali   21  3..................................................................................LPQMPAAAYNLGGVAQPSGFKHPFAIENIYKMPGGLAF-SAMQPVPAAYPLMGSSLGTGWPHVYGSAGMIDSATPISMASGDYSAYGVPLKPLCHAAGQTLPAI.................... 115
5 -5.510sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1  ali   11  1............................................................................................................................DDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVVNG-----WEQVSPVSVD---------KVGTFFRYAAP. 68
6 -5.190sp|P38435|VKGC_HUMAN Vitamin K-dependent gamma-carboxylase OS=Homo sapiens GN=GGCX PE=1 SV=2  ali   17  32.................................................................................................................PGLHLENFVSEDLGNTSIQLLQ---G-EVTVELVAEQK-----NQTLREGEKMQLPAGEY---HKVYTTSPSPS................... 93
7 -5.070sp|Q5SXH7|CJ081_HUMAN PH domain-containing protein C10orf81 OS=Homo sapiens GN=C10orf81 PE=1 SV=2  ali   15  33......................................................................................................................................YLALTEATGRICVSQWEGPPRLGCIFCHGDHLLVNDLKPQSLEEVSLFLTRSIQ----KEKLKLTIGRI... 98
8 -4.880sp|Q96E52|OMA1_HUMAN Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=2 SV=1  ali   135......................................................................................................................NFHTSPRFQAAPVPLLLMIL--------------------PVQKLFAIIVGRGIRKWWQALPPNKKEVVKENIRKNK........... 192
9 -4.870sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1 SV=1  ali   1..........................................................................................................................EEIVHDLDTCEVTVE-HEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRNWHARSLLDRKFKLIC...... 84
10 -4.860tr|E7EW47|E7EW47_HUMAN Uncharacterized protein OS=Homo sapiens GN=MUC4 PE=4 SV=1  ali   15  7............................................................................................................VSLFPYGAGAG---DLEFVRRTVDFTSPLFKPATGFPLGSSLRD----SLYASQAGTLWPWWLRSGTMLTSPLVGGPHFIRNTRRSMVNTA....... 90

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.