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Query: ACL93477.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKIIGIDLGTTNSCVAIMDGKTPKVIENAEGARTTPSVVAFLEDGERLIGQPAKRQAVTNPTNTLFAIKRLIGRTASDPVVEKDKGMVPYEIVKGPTGDAWVKAHGKDYSPQEVSAFILQKMKEAAEAHLGEPVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKNDGKKIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDLRIVDYLADEFKKEQGVDLRKDKLALQRLREEAEKAKKELSSTAQYEVNLPFISMNASGPLHLNIKLSRAKLEALVDDLIARTIGPCEQALKDAGLKKSDIDEVILVGGMSRMPKVQQAVQDFFGREPHKGVNPDEVVALGAAVQAGVLQGDVKDVLLLDVTPLTLGIETLGGVFTPLIERNTTIPTKRSQTFSTADDNQSAVTIRVFQGERPMAQDNKMLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVHAKDKATNKEHSIRIQANGGLSDSDIERMVKEAEANKAADEKKKQLVEAKNQGEAILHSTEKALAEHGDKVGAAEKTAIETGITELKTALEGEDVEAIQAKTQALIQASMKLGEAMYAAQQGSAEGGDAKADDGVVDAEFEEVDDNKPAALast
1 -8.750sp|O43301|HS12A_HUMAN Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2  ali   19  1........................................................................................................................................................................................................................................................................................................................................................................................LFGLDPAVIKVRRSPLTYGVGVCTDVFDKFISADQSVALGEKRSYTPAKPSQLVIVINIYSSEHDNVSGVKKCGTLRLD-LTGTSGTAVPARREIQTLMQ--IKATAIDIATSKSVKVGID...................................................................................................................................... 152
2 -5.010sp|Q9HA90|CCD48_HUMAN Coiled-coil domain-containing protein 48 OS=Homo sapiens GN=CCDC48 PE=2 SV=2  ali   30  7............................................................................................................................................................................SALAHHYGLDRGVENEIVVLATG-------LDQYLQEVFHHLDCRGAGRLPRADFR................................................................................................................................................................................................................................................................................................................................................................................................................... 55
3 -4.310sp|Q9UBX5|FBLN5_HUMAN Fibulin-5 OS=Homo sapiens GN=FBLN5 PE=1 SV=1  ali   14  27..........................................................................................FYMRQTGPISATLVMTRPIKGPREIQLDLEMITVNTVINFRGSSVIRLRIYVSQY...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 81
4 -4.300sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2  ali   21  12.......................................................................................................KCQARLFFPASGSVSIQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMGLS--KLLS-PILA--RYGMDKQTGRAKLLRDMNQGLFDCALL........................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
5 -4.280sp|Q92621|NU205_HUMAN Nuclear pore complex protein Nup205 OS=Homo sapiens GN=NUP205 PE=1 SV=3  ali   11  5.................................................................................................................QICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQAPVVPYWR---LPGLGIIIYLLKQSANDFFSYYD...................................................................................................................................................................................................................................................................................................................................................................................................................................................... 81
6 -4.180sp|O00592|PODXL_HUMAN Podocalyxin OS=Homo sapiens GN=PODXL PE=1 SV=2  ali   42  57................................................................................................................................................................AGLELLTSGDLPTLASQSAGI.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 77
7 -4.070sp|P57740|NU107_HUMAN Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1  ali   18  1.................................................................................................................................................................................................................................................................................................................QVIPRTPSSFRQPFSRSLLRQPDISCILGTGG--KSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSITEDVTISAVMLR.......................................................................................................................................................................................................................................... 93
8 -4.030sp|O95967|FBLN4_HUMAN EGF-containing fibulin-like extracellular matrix protein 2 OS=Homo sapiens GN=EFEMP2 PE=1 SV=3  ali   14  5..........................................................................................FYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAY...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 59
9 -3.960sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3  ali   10  4...................................................................................................................................................SERRGLGRGSPAEWGQRLLLVLLLGGCSGRIHQLALTGEKRIQLNSFGNGSLEVELSVLR---LGLREAEEKSLLVGFSLSRVRSGRVRSYSTRDFQDCPLQKNSSSFLVLFLINTKDLQVQVRKYGEQKTLFIFPG........................................................................................................................................................................................................................................................................................................................................................... 142
10 -3.900tr|A8MWC2|A8MWC2_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   18  1..........................................................................................................................................MVTLPSGTWAFSCPYLALVDGGAGLELLVLSNHTALATQSTGITGVNHHTQLLK....................................................................................................................................................................................................................................................................................................................................................................................................................................................... 73

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.