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Query: ACL93485.1, from C.crescentus

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTPYDDSPAQAVSTAPRTTGPSLIDGFGRAVTYLRVSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVGLGVRKLRLTGGEPLVRKGFIGLVARLSRHLSSGALDELTLTTNGSQLERYASDLARHGVRRINVSLDTLKPALFRALTRGGDVTRVIAGIDAAQAAGMTVKINAVALKHDNAGEIPALIQWAHGRGCDITLIETMPLGEVDQDRTDQFLSLQDVRRDLSSFWTLTDIPDSTGGPARYVHVAETGGRLGLITPLSNHFCDTCNRVRLTCTGTLHTCLGRDDASDLRAEIRRGASDAELVDAIHLAIGAKPKGHDFQIAAAQPAVARHMSTTGGLast
1 -5.010sp|Q6IQ32|ADNP2_HUMAN ADNP homeobox protein 2 OS=Homo sapiens GN=ADNP2 PE=2 SV=1  ali   18  1...........................................................................................................................................................................................................................................................................PPPDKYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKRTGLLKQT........................... 55
2 -4.880sp|Q6P1X5|TAF2_HUMAN Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3  ali   8  16...........................................FTRMFCCKSCPNIVKTNNFMSFQSY--FLQKTMPVAMALLRDVHNL--CPKEVLTFILDLIKYND----NRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLEEITRFLNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEGHFVDIRIAAL.......................................................................................................................................... 184
3 -4.430sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Homo sapiens GN=CASZ1 PE=2 SV=4  ali   32  18................................LRRFGTKDFCDGQCDFCVVEECGAL.................................................................................................................................................................................................................................................................................................... 49
4 -4.380sp|O75064|DEN4B_HUMAN DENN domain-containing protein 4B OS=Homo sapiens GN=DENND4B PE=1 SV=4  ali   11  26...........................................GAWAYLSP----------LVLRKELESLVENEGSEVLALPELPSAHPIIFWNLLWYFQRLRLPSILPGLVLASCDGPSHSQAPSPWLTPDPASVQVRLLWDVLTPDPLYVLWRVHSQIPQRVVWPGPVPASLSLALLESVLRHVGLNEVHKAVGLLLET--EILFLTMAALGKDHVDIVAFDKKYKSAFNKLASSMGKEELRHRRAQMPTPKAI-------------------DCRKC-----GAPPEC......................................................... 260
5 -4.220tr|E5RGF8|E5RGF8_HUMAN Uncharacterized protein OS=Homo sapiens GN=C5orf45 PE=4 SV=1  ali   7  2............................................................................................................................................................................................................................................................................ASLQRSCCSCRQAHQVKKSVKWTCKACGEKQSFLQSSPDTELLLPSFLFLQEVKWME........................ 64
6 -4.090tr|B4DYA3|B4DYA3_HUMAN Uncharacterized protein OS=Homo sapiens GN=FBXO25 PE=2 SV=1  ali   13  7.........................................................................IYVHKESTKERCTLGEAFNRLDFSSAIQDIRRFNYVVKLLQL-------IAKSQLTSLSGVAQKNYFNILDKIVQKVLDDHHNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNIN-ICRLETILAWQQQLQDLQMTKQVNNGLTLSDLPLLSEDRQLWKKLCQYHFAEKQFCRHLILSELMYFALQKHYPAKEQYGDTLHFCRHCSILFWKDSG--HPCTAADPDSCFTPV-----SPQHFIDLF............................... 248
7 -3.880sp|Q86XP1|DGKH_HUMAN Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH PE=1 SV=1  ali   12  11...........................................SQAAEELITRICDAATIHCLLEQELAHAVNACSHA-LNKANPRCPESLTRDTATEIAINVKALYN---------ETESLLVGRVPLQLESPHEERVSNALHSVEVE-LQKLTEIPWLYYILHPNED.................................................................................................................................................................................... 125
8 -3.870sp|Q8NDB2|BANK1_HUMAN B-cell scaffold protein with ankyrin repeats OS=Homo sapiens GN=BANK1 PE=1 SV=3  ali   7  1........................................RNTIPLAVVLPTEIPCENP------GEIFIILRDEVIGDTVEVEFTSSNKRIRALWNKKVWCMKALEFPAGSVHVNVYCDGIVKATTKIKYYPT-AKAKECLFRMADSGESLCQNSIEELDGVLTSI...................................................................................................................................................................................... 123
9 -3.840sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3  ali   11  3............................APEEFTDEQPTVMTD-KCHDC-----------GAILEEETLGLAIVVLSTFIHLSPDLAA-PLLLDIMQSVGRLASSTTFSNQAESMMVPGNAAFLRCIFHQLAPNGI--PQLFQSTIKDGTFNELSSIAALSQLLEGLNNKKNLPAGGAMIRCL------ENIATFMEALPMDSPSSLWTTISN------------QFQTFFAKLPCVLPLKCSLDSSLRIMICLLKIPSTNATRSLLEPFSKLLSFVIQNAVFTLAYLVE--LCGLCYRAFTKERDKFYLSRSVVLELLQALKLKSP...................... 286
10 -3.830tr|F6UWW1|F6UWW1_HUMAN Uncharacterized protein OS=Homo sapiens GN=C5orf45 PE=4 SV=1  ali   7  12..................................................................................................................................................................................................................................................................................CCSCRQAHQVKKSVKWTCKACGEKQSFLQSSPDTELLLPSFLFLQEVKWME........................ 64
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;