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current user: public |
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Query: ACL93487.1, from C.crescentus |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 | |||||||
# | Score | Template | Links and tools | %id | First | MKAGPDAEADALGDEEDIAMFVQALAGVNMDYRRVLSLLIPRLAALEERGDTAGAVRLIQEIQAIINAPERPEH | Last |
1 | -5.440 | sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4 PE=1 SV=2 | ali | 14 | 4 | .............EGDDLERALAKLTRLRIHVSYLLTSVLPHLELREIGYDSEQVDGILYTV............ | 52 |
2 | -5.030 | tr|F5GWH3|F5GWH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=MRS2 PE=4 SV=1 | ali | 25 | 5 | .................................RSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRAN. | 44 |
3 | -4.930 | sp|Q12947|FOXF2_HUMAN Forkhead box protein F2 OS=Homo sapiens GN=FOXF2 PE=1 SV=2 | ali | 22 | 4 | ....................FRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAP................... | 38 |
4 | -4.900 | sp|Q8NHS4|CB063_HUMAN Uncharacterized protein C2orf63 OS=Homo sapiens GN=C2orf63 PE=2 SV=3 | ali | 4 | 5 | ..........TLQESMNLDALTKYMKHLEDKYAEIKQAMLIKYVPAQRKADLDEEMIVLLKRRDVAENLNK... | 65 |
5 | -4.800 | sp|P42858|HD_HUMAN Huntingtin OS=Homo sapiens GN=HTT PE=1 SV=2 | ali | 15 | 29 | ..........................TMENNLSRVIAAVSHELITSTTRALTFGCCEALCLLST.......... | 66 |
6 | -4.730 | sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 | ali | 21 | 35 | ..................................LFSMLLPLIIA--AAAIPKVAVEVFGLVQQLL........ | 69 |
7 | -4.670 | sp|Q14573|ITPR3_HUMAN Inositol 1,4,5-trisphosphate receptor type 3 OS=Homo sapiens GN=ITPR3 PE=1 SV=2 | ali | 33 | 24 | ..........................................LALMESRHDSENAERILISLR........... | 44 |
8 | -4.590 | tr|E7ERX2|E7ERX2_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZSWIM4 PE=4 SV=1 | ali | 22 | 51 | ...................................FPTACARVDTLRAHGYPRQALRLASAIINTL........ | 81 |
9 | -4.580 | sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3 | ali | 16 | 38 | ..............DEEVREHLRNNLHLDDPAVKWQLNLYKDVLKSEEPFNPEKTVERVQRISAAVFHLEQVEQ | 101 |
10 | -4.570 | tr|E9PL38|E9PL38_HUMAN Uncharacterized protein OS=Homo sapiens GN=PSMD13 PE=4 SV=1 | ali | 15 | 46 | ........VRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKNIGDLQVTKETIEDVEEMLNN...... | 106 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |