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Query: ACL93468.1, from C.crescentus

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKQPLTDDPQESLAQGESERLPPRFATYFHIHLVSDSTGETLNAMARAVCARFTDILPIEHIYALVRSTRQLDRALEEIAGAPGVVMHTIVDPGLRAALEEGCRKLEMPCIAALDPVISAMSRYLGARISTRVGAQHALTNDYFDRIEALDYAIAHDDGQGGQDLTQADVILVGVSRTSKTPTCIYLAHRGVRAANVPLVPGRPPPPELFELKNTLIVGLITSPDRLIQIRRNRLLSLKENRESDYVDADAVRQEIIAARRLFERQNWPVIDITRRSVEETAAAVINLLSGGRGKVEVLGLast
1 -91.300PF03618.14; PSRP_LARHH/8-265; Kinase/pyrophosphorylase  ali follow..  32  1................................YFVSDRTGITAESLGNALLTQFDMLEFKRETIPFIDTADKAMAVAEQIRQRRPLVFVSIVNPFVREAIQVDD---CAMVIDFFHAFVGQLENELEQKATLTVGKSHISEEKYDTRIEAVNFSLNHDDGVKLKDLAEADVILVGVSRSGKTPTCLYLAQYGIKAANYPLTPEDLDSPTLLLPYRKKIFGLTIEPQRLHHIRNERK------PDSRYASIDNCRREVNEAESLFRHHGVPFISTTHKSIEEIASTIL.............. 258
2 -7.390PF13238.6; A0B5Y2_METTP/3-117; AAA domain  ali follow..  18  1..........................................................................................................................................................................IALTGTPGTGKTTVSGLLPFRVVNLNDL-GDDVLIIEGHFAHHFADEAIVLRLHPNVL----RRRLEARGYSASK----RENVEAEA............................................ 113
3 -7.340PF07931.12; Q98FG2_RHILO/59-238; Chloramphenicol phosphotransferase-like protein  ali follow..  10  4..........................................................................................................................................................................VLLNGVGSAGKSSIARALQTIAMAGQGNDLIVDDVLCNGELSDCVDLLSAFDFHLVGVMAPLEVLEAREARRADRLPGLARWQYERVHAGISY-------EVDTSQSTPLECARRIQQRFQ.......... 180
4 -6.800PF17368.2; YWCE_BACSU/2-86; Spore morphogenesis and germination YwcE  ali follow..  25  2.........................................................................................................................................................................DMFFAYLLVASATPLFIWLDNKKVALSAIPPI.................................................................................................... 33
5 -6.500PF02566.19; A2DVR0_TRIVA/43-144; OsmC-like protein  ali follow..  12  1..............................................................................................................................................................SGHGSAGPTPPDHIMLAYGSCFGGSVKHILEDNGIKVKDLTVEMEAEWELVPHRRIKEFRSNCIIEADGLTQEMADAALKQASDEVCMVANTLKRSPKITV.......................................... 101
6 -6.010PF18244.1; R7H581_9FIRM/3-69; Cellulose-binding protein CttA N-terminal domain  ali follow..  14  1....................................................................................................................................EPGFYFSEDNRAFRVEDLIESVVSIDENGKQTTIDLSQITFKGA-----TPKSTYVQTEKYFAGTI....................................................................................................... 61
7 -5.950PF07287.11; G4N7E2_MAGO7/10-368; Acyclic terpene utilisation family protein AtuA  ali follow..  12  62....................RETAHIIAKNGIKVVHDGGALNPESMARETRALLHSYGVTGLKIAYVDGDNVMGMLEQLKAPGKAAKHLDVEGRTLSDIDKP----------------VLSANAYVGMGGI----------------VAALK--------------LGADIVISGRCCDASPVMGAAAWWHNWSETDYDRLAGALIAGHIIECGCYATGGNFSGFKHIPDNYDQGFPVAEIANDGTFDILLLVSKDTVTAQLVYEIQG--VADLRGVKIKESGKNRVTVSGIT........ 300
8 -5.680PF13589.6; A5G4D8_GEOUR/22-165; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase  ali follow..  9  1...............................................................................................................YEPHSALMDIIDNSVAADALNVKLYVDLVEGKTINQRNNVARYRVVDDGKGMDEDGIKNAFKLGSDNYKQNSLSKY---MGLKSAGFSLGLRIQI---ISKTEGQLTRKYFLDRKVIEARNEYVV................................................................. 121
9 -5.360PF03668.15; RAPZ_ECOLI/1-282; P-loop ATPase protein family  ali follow..  20  4..........................................................................................................................................................................MIVSGRSGSGKSVALRALEDMGFYCVNLPVVLLPDLARTLADREISQLLFLDADRNTLIR-RYSDTRRLHPLSSKNLSLESAIDKESDLLEPLRSRADL-IVDTSEMSVHELAEMLRTRLLGKRERELTM. 162
10 -5.360PF07475.12; HPRK1_OCEIH/130-300; HPr Serine kinase C-terminal domain  ali follow..  19  1..............................................................................................................................................SKFAPFTAIHGVLVDIYGVG--------VLIIGQSGVGKSETALELVKRGHRLVADDNVEIRQEDYDSLIGNAPPLIEHLLEIRGLGIINVMTLFGAGSVRSKKRISL................................................... 100
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.