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Query: ACL93474.1, from C.crescentus

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVRPMANNPGAKKAIRKIARRTEVNTARRSRVRTFLRKFEDAIAKGDVAVAKAAFVEAQSELMRAVSKGVVHPNTGSRKVSRLAARLKKLDKAAALast
1 -47.400PF01649.18; D9T9K3_MICAI/2-84; Ribosomal protein S20  ali follow..  34  1......ANIKSQIKRNRQNEKRRLRNKSVKSSLKTAIRKFHEAAEAGDTEKATVLMREATRKLDKAASKGVIHSNQAANRKSAIAKRV........ 82
2 -6.910PF02091.15; SYGA_PELCD/3-280; Glycyl-tRNA synthetase alpha subunit  ali follow..  7  207............................LFNLFDMYEKECSRLAKSQLVLPAYDYVLKASHAFNLLDARGAISVTERAHYIGRVRNLARLCAE... 271
3 -6.370PF10925.8; D5XEL2_THEPJ/40-96; Protein of unknown function (DUF2680 topsan)  ali follow..  7  14....................................................DKMLELRKELLQKYVDMGKITKEDADARIQWMEQNHNARIE... 54
4 -6.320PF10938.8; E6X1K7_NITSE/69-208; YfdX protein  ali follow..  9  5....................................TQQTLVQLSQNKKDEAIKSLEKAIGKMEVVLSH........................... 37
5 -6.240PF04010.13; Q12XB6_METBU/11-83; Protein of unknown function (DUF357 topsan)  ali follow..  13  3.....ERLLSEALAKADISPIENSHMRTVAEDYKNMARSYYE-IRSEDPVNALICFSYGHAWLDAGARLGVF........................ 73
6 -6.220PF16148.5; F0RFZ5_CELLC/37-396; Domain of unknown function (DUF4856 topsan)  ali follow..  13  235..............................NDIYEAFKLGRAAIVAKDYELRDEQAQIIREKVSKVVAVRSVYQSGKEVLESDKASAFHSLSEALG 302
7 -5.970PF18071.1; J3D3B1_9BURK/5-145; HMW1C N-terminal  ali follow..  15  4....................................LENFEYLCYSRQQEPAARELVKLLLLIDRSLSAAIGAQERDAHGLTRITSAISALFSDPS 74
8 -5.650PF01217.20; COPZ1_BOVIN/12-153; Clathrin adaptor complex small chain  ali follow..  16  79................................LMTVLNCLFDSLSQ-EKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV..... 142
9 -5.450PF08332.10; F8WHB5_MOUSE/57-184; Calcium/calmodulin dependent protein kinase II association domain  ali follow..  11  2.............................KQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFE................................ 36
10 -5.440PF00838.17; I1CDG2_RHIO9/1-163; Translationally controlled tumour protein  ali follow..  9  80.........................KKSYMTYIKGYMKALKKELQETKPDRVEAFEKGAASLVKRILTN........................... 123
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.