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current user: public |
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| Query: ACL93481.1, from C.crescentus |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . | |||||||
| # | Score | Template | Links and tools | %id | First | MSKLTHIDDQGRARMVDVSEKPATAREAVAAGFVRMSAETLALAISGSGRKGDVRAVAELAGVMAAKKTSDLIPLCHPLALSKVEVAVEPADGGLSVTARVKTTGPTGVEMEALTAASVACLTIYDMLKAAEKGMVIEAVRLLEKTGGKSGDWKADQP | Last |
| 1 | -80.900 | PF01967.21; B0CRH2_LACBS/355-512; MoaC family | ali follow.. | 51 | 1 | ..............MVDVAHKTCTPRSATATGYIYVTRVAYDLVEAKAQRKGDVLAVAQVSAIMAAKKTSSLIPLCHPLTLSHIDVNFMPELPQIICTAQVTCEGKTGVEMEALTAVSVGLLTIWDMLKAVGKEMEIGGVMVINKSGG.......... | 158 |
| 2 | -5.870 | PF03120.16; R5T205_9CLOT/311-389; NAD-dependent DNA ligase OB-fold domain | ali follow.. | 18 | 12 | ........................................................................................................GRTGLEPVIVQGSTIRRATLHNEDYVIGKDLKIGDTVSIRKAA........... | 61 |
| 3 | -5.570 | PF11875.8; B8NRA0_ASPFN/641-802; Domain of unknown function (DUF3395 topsan) | ali follow.. | 12 | 19 | ...................KKLVPIKRAESLQATELMTEQVRRRQAKEERQDGLVITKAEYGHYPSKKKGNDVGKEYEVVDVTIPVAGLVDRSQLVIPKNMVKVSLSSVCNFMRIQLANYEQFFYDPAPLLPKTLKI..................... | 140 |
| 4 | -5.330 | PF14951.6; F1PKB7_CANLF/27-415; Domain of unknown function (DUF4503 topsan) | ali follow.. | 11 | 245 | LSELDSITQVNSICCLQGPGTVVGVDESTAFSWPTCDLCGNERLDQSPGDRGAFSCRDCSHVVTSPVLRRHLQVFLDCPTRPQCAVRVKLSQTSIASLLSLAACEDGSYEVKSVLGKEVGLLNVQSITTHPASCVGLEEIELL............... | 389 |
| 5 | -5.280 | PF00712.19; DPO3B_CAUVC/1-121; DNA polymerase III beta subunit, N-terminal domain | ali follow.. | 13 | 14 | ...........................................................LGHVQSVVERRNTIPILSNILLSAEGDRLSFSATDLDMEIIDEGF----AQIDVPGQITAPAHTLYEIVRKLPDGADVS.................... | 88 |
| 6 | -5.270 | PF06230.11; L0DKU6_SINAD/162-292; LpxI C-terminal domain | ali follow.. | 11 | 18 | .................................IEFGWGLAKEMGRLDVGQSVAVKEQAALAIEAIEGTDRCIERAGDLAGGWTLVKVAKPQQDMRFDVTIENLHQAGARVLAIEAGKTIVIDQAEVVDLANR......................... | 123 |
| 7 | -4.980 | PF03307.14; E3145_ADE02/10-126; Adenovirus 15.3kD protein in E3 region | ali follow.. | 17 | 5 | ..................TEQRLLERRKAASERERLKQEVEDMVNLHQCKRG-------FCVVKQAKLTYEKTTTGNRLSLPTQRQKLVLMVGEKPITVTQHSAETEG-GPEDLCTLIKTMCGIRDLI.............................. | 116 |
| 8 | -4.960 | PF12369.8; H0X132_OTOGA/282-349; Gonadotropin hormone receptor transmembrane region | ali follow.. | 18 | 2 | ..................................................................RQISELHPICNKSILRQ-EFDDMTQARGQRVSLAEDDESSYSKGFDMLYN--------YDLCNEV........................... | 60 |
| 9 | -4.950 | PF15794.5; H3AGC2_LATCH/55-268; Coiled-coil domain-containing protein 106 | ali follow.. | 17 | 142 | .............EYHGVDRNTVALTTPIAELLI-VAPEKVAEIGEFDSSKERLLEYSKLMKVQALKRNKLLLPISY................................................................................. | 214 |
| 10 | -4.940 | PF00153.27; O80412_SOYBN/169-260; Mitochondrial carrier protein | ali follow.. | 14 | 9 | ......................................................LAGSASAEVIAD--------ALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLWGRQIPYTMMKFASFETIVEL........................... | 87 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |