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Query: ACL93485.1, from C.crescentus

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTPYDDSPAQAVSTAPRTTGPSLIDGFGRAVTYLRVSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVGLGVRKLRLTGGEPLVRKGFIGLVARLSRHLSSGALDELTLTTNGSQLERYASDLARHGVRRINVSLDTLKPALFRALTRGGDVTRVIAGIDAAQAAGMTVKINAVALKHDNAGEIPALIQWAHGRGCDITLIETMPLGEVDQDRTDQFLSLQDVRRDLSSFWTLTDIPDSTGGPARYVHVAETGGRLGLITPLSNHFCDTCNRVRLTCTGTLHTCLGRDDASDLRAEIRRGASDAELVDAIHLAIGAKPKGHDFQIAAAQPAVARHMSTTGGLast
1 -45.700PF06463.13; MOAA_PSESM/185-315; Molybdenum Cofactor Synthesis C  ali follow..  38  1...........................................................................................................................................................................................................LDVSFIEEMPLGISEHSRAESFYSSDQVRERIAERYTLIPSDSTQGPSRYWRLAQAPGIRIGFISPHSHNFCGTCNRVRLTVEGRLLLCLGNEHSVDLKAVLRATPGQPELEKAIIDAMQLKPWSHNF.................. 131
2 -19.700PF13394.6; B8DWG8_BIFA0/78-188; 4Fe-4S single cluster domain  ali follow..  15  2......................................VSGCPFHCVECYNSSIWDFQAGHEYNDKLEAQIMDDLAQSFVQGITFLGGEPLLNTG--VLLPLARKIRERFGHTKDIWCWTGYTWEELMRDGETQDKLDLLHEIDILVDGR....................................................................................................................................................................................................... 111
3 -15.800PF13353.6; D1BLW3_VEIPT/12-149; 4Fe-4S single cluster domain  ali follow..  19  6.................................IRTSIVTGCTHCCYNCFNEEYQDFNAGKVWTQAETDLVVSYVKNPTCSGLTLLGGEPFQNVQ--GLLPVVRAVRAAAPKKKIWAYSGYEIDDILEDELRSALLQEIDILVDGVDELKDPALRFRGSSNQRI......................................................................................................................................................................................... 137
4 -13.700PF04055.21; CDKAL_HUMAN/208-381; Radical SAM superfamily  ali follow..  14  1...................................ISINTGCLNACTYCKTKHAR--GNLASYPIDELVDRAKQSFQEGVCEIWLTSED--IGTNLPTLLWKL--VEVIPEGAMLRLMTNPPYILEHLEEMAKILYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQE........................................................................................................................................................ 169
5 -7.800PF00682.19; LEU1_ECOLI/4-273; HMGL-like  ali follow..  17  1..................................QVIIFD-TTLR------DGEQ--ALQASLSVKEKLQIALALERMGVDVMEV--GFPVSSPGDFESVQTIARQVKNSRVCALARCVEK--IDVAAESLKVAEAFRIHTFIATMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATT............................................................................................................................................... 162
6 -7.260PF14719.6; A0A1I7VJK0_LOALO/49-231; Phosphotyrosine interaction domain (PTB/PID)  ali follow..  15  7.............................................................................LGNVLTIIAKGEECLAKPLSLIWRTYCNRQRAELPMKLTVTRSGLKAETKQQGITEYWSHRLTCSAPSNLPRVFCWVYK-----------HEGKKMKPELRCHAALC---KKRSDPYRIADTLEHYLRAALQEYR......................................................................................................................................... 128
7 -6.770PF13714.6; B9K4D9_AGRVS/8-247; Phosphoenolpyruvate phosphomutase  ali follow..  14  22.......................................................................ARILAALGFPALATTSGVPEGIVSRDDTLDNCRAIVAATSLPVSADLEKGF-AAETIVTAASIGLAGCSLE-DHTGQRDNPVYDFTLAVERIAAAAEARRALPSDFRCENFLWGRPDLDDTIKRLQAFEKAGADVLYAP........................................................................................................................................... 175
8 -6.430PF09810.9; M2TDQ5_COCH5/158-495; Exonuclease V - a 5` deoxyribonuclease  ali follow..  11  3.......................LERF-RTKPKKPLSVTD-CELQYLYTLSKFGRKPRTQAMRTGSKIHEKLEAEVHTTV-PVQVESKEDRFGLRIWNTISGLRCLSETGLTRELEVVLEGQVVNGIIDELSIIPLPSDQLRISNAFAKDCTGGMLQSDRQIYITDVKTRSSNSLPAGLESLSLNTVDAETVFSRYDLQPLENFSDTFMQAVGGIGPHNQAPNYPNLLSLWSLLVTEMQIAVPPTSLSPIVRAEFRYAKNGHVIG-VEIEEAFKCRICD...................................................................... 330
9 -6.380PF01565.23; Q82SS0_NITEU/46-186; FAD binding domain  ali follow..  13  9...............................................................SVEEVQAIVRLAAKFNVKNWGYGEKTACYPGGITVVLERMNRIHEVDEALGYAVIEPGVTYKQLNEFLKANYPTTQFASVLGNALDKGRGLTPYADHFGSLCGMDVVLPDGRLLETG......................................................................................................................................................................... 141
10 -6.070PF01261.24; Q7D360_AGRFC/22-241; Xylose isomerase-like TIM barrel  ali follow..  13  23.................TLDKAALRDIREKADELGLYLESGVGKINPYCSAEAPEFRAIGEGDVILGFTRMIEASASIGCHELWISPGNF-QLQAIEKVLLKLAPVARATGVHLNMETHDEITSFEIMRLIEKIGEDCMGVVFDTAN.......................................................................................................................................................................................................... 172
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.