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Query: ACL93485.1, from C.crescentus

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTPYDDSPAQAVSTAPRTTGPSLIDGFGRAVTYLRVSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVGLGVRKLRLTGGEPLVRKGFIGLVARLSRHLSSGALDELTLTTNGSQLERYASDLARHGVRRINVSLDTLKPALFRALTRGGDVTRVIAGIDAAQAAGMTVKINAVALKHDNAGEIPALIQWAHGRGCDITLIETMPLGEVDQDRTDQFLSLQDVRRDLSSFWTLTDIPDSTGGPARYVHVAETGGRLGLITPLSNHFCDTCNRVRLTCTGTLHTCLGRDDASDLRAEIRRGASDAELVDAIHLAIGAKPKGHDFQIAAAQPAVARHMSTTGGLast
1 -104.000d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  32  1....................EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQI---DGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ....... 327
2 -18.700d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  42.................................LLSIKTGACPEDCKYCSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLE--ACMTLGTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPVPINMLVKVKGTPLADNDDVDAFDFIRTI................................................................................................................... 244
3 -16.800d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  16  20YTSYPTALEFSEDFGEQAFLQAVARYPERPLSYVHIPF---CHKLCYFCGCNKIVTRQQHKADQYQEIVHRAPLFAGRHVSQLHWGGGTPLNKAQISRLMKLLRENFQFNADAEISIEVDREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFT-STNIDLIYGLPKQTPESFAFTLK------RVAELNP........................................................................................................................................ 231
4 -7.150d1zlpa_ c.1.12.0 (A:) automated matches {Clove pink (Dianthus caryophyllus) [TaxId: 3570]}  ali model 3D-neighbors follow..  13  5...........................................................HRLIEEHGSVLMAAVVEKTGFHAAFVSGGLPLTTTEVVEATRRITAAAPNLCVVVDGDT-GPLNVQRFIRELISAGAKGVFLE-DQVWPKK-AVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVE........................................................................................................................................... 182
5 -7.140d4ogca2 d.4.1.8 (A:513-673) CRISPR-associated endonuclease Cas9/Csn1, HNH domain {Actinomyces naeslundii [TaxId: 1115803]}  ali model 3D-neighbors follow..  14  37............................SRGDIVRLDALELQGCACLYC-------TIGYHTCQLDHIV--------------QAGPGSNNRRGNLVAVCERCNRSKSNTPFAV........................................................................................................................................................................................................................................... 104
6 -6.900d4lrsa1 c.1.10.0 (A:10-294) automated matches {Thermomonospora curvata [TaxId: 471852]}  ali model 3D-neighbors follow..  11  3..................................RVRITD-STLR------DGSHAMAHQ--FTEEQVRATVHALDAAGVEVIEV--SHGDGLGGSSFNYGFSAVDE-----IDLVAAAVDEAVNAKIAVLLLPGVGTVRDLKRAHDASVARIATHCTEADVSCQHFAAARELGMETVGFLMLAHRIGPEELARQARIMVDAGAQCVYV-----SAGALVLSDVQARVQALVREIGHEAQVGFHGHQNLSLGVANSVLAYQNGARQIDGALCALGAGAGNSPTEILAATFERLNIETGVNVQAAL-------AAAEEVVRPYLPR........................ 269
7 -6.760d1tfza2 d.32.1.3 (A:196-408) 4-hydroxyphenylpyruvate dioxygenase, HppD {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  12  6............................RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSED--IFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELG-------ILVDRDDQGTLLQIFTKPLGDRPTI-FIEIIQ........................................................................................................................................ 181
8 -6.520d1xg4a_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  16  10...........................................................RAALTKENPLQIALLAQRAGYQAIYLSGGLPSTLDDVLTDIRRITDVCSLPLLVDAGFGSSAFNVARTVKSMIKAGAAGLHIE-DQVGAKR-AIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPE........................................................................................................................................... 187
9 -6.440d1hlra6 a.56.1.0 (A:81-193) automated matches {Desulfovibrio gigas [TaxId: 879]}  ali model 3D-neighbors follow..  18  2...........................PENLHPLQKAWVLHGGAQCGFCSPSAKGLLDTNADPSREDVRDWFQ-----KHRNARCTGYKPLVD................................................................................................................................................................................................................................................................ 67
10 -6.430d3lyea_ c.1.12.0 (A:) automated matches {Cryphonectria parasitica [TaxId: 5116]}  ali model 3D-neighbors follow..  21  31.......................................................................ARTAMELGFKSLYMTGGQP----AIAQLHDMRDNADMIANLDPFGPPLGPIMVARTVEHYIRSGVAGAHLE-DQILTKRCGHLSGKKSRDEYLVRIRAAVATKRRLRSDFVLIARTDAEECIERLRAARDEGADVGLLE........................................................................................................................................... 191

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.