FFAS03 results for 15604726

Query: gi|15604726|ref|NP_219510.1| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300`
#	Score	Template	Links and tools	%id	First	`MPSSFVSQLSPSLFSILREQLEKKGFTISIPPHTVFQGRSPTVSCTVYQSGKIVVQGKGTQEFVEFFLEPEILQTFSSQNVQQDLRSRIGVDESGKGDFFGPLCTAGVYASSPQAIEALYKTSICDSKLIPDAKILSLAQNIRSLCACKVITLFPEKYNALYANFQNLNSLLAWTHATIIDNLAPHPAGAVFAISDQFASSERVLLQAVRKKCSDIELIQRHRAEQDVVVAAASILAREAFLSSIHALESQYQIRLLKGASGKVKQRAKEILHNKGQVVLEKVCKTHFKTFNEVLGSGNQ`	Last
1	-57.900	`sp\|O75792\|RNH2A_HUMAN Ribonuclease H2 subunit A OS=Homo sapiens GN=RNASEH2A PE=1 SV=2`	`ali follow..`	17	4	`.............................................................SELERDNTGRCRLSSPVPAVCRKEPCVLGVDEAGRGPVLGPMVYAICYCPLPR-LADLEALKVADSKTLLESERERLFAKMEDTVGWALDVLSPNLISTLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVGMPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEDLDTDYGSGYPNDPKTKAWLKEHPVFGFPQFVRFSWRTAQTILEKEAE`	250
2	-6.510	`sp\|Q9H330\|CI005_HUMAN Transmembrane protein C9orf5 OS=Homo sapiens GN=C9orf5 PE=1 SV=2`	`ali`	12	60	`.....................................................................................AVAGGAYYLGEGAIIGPILLCILVVASNIYSAMLVSPTNSVPTPNQTPWPAQPQRTFRDISERSEIFSKVDVVSS............................................................................................................................................`	135
3	-6.180	`sp\|Q9BZL6\|KPCD2_HUMAN Serine/threonine-protein kinase D2 OS=Homo sapiens GN=PRKD2 PE=1 SV=2`	`ali`	17	255	`...........................................................................................EVLGSGQF------GVVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVA.............................................................................................................................................................`	300
4	-6.050	`sp\|Q8N7U6\|EFHB_HUMAN EF-hand domain-containing family member B OS=Homo sapiens GN=EFHB PE=2 SV=4`	`ali`	7	145	`...........................................................................................EEGSAYSLLYP--------------TIFARKGVFERDFFKTRSKEEIAEILCNI-----VKLSDEEFENVWNLASKKHEVCVENIRNVLDELRHADRIKCKTLM.........................................................................................................`	233
5	-5.910	`sp\|Q9NR31\|SAR1A_HUMAN GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1`	`ali follow..`	12	30	`.......................................................................................FLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMT--GHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPIL---------ILGNKIDRTDAISEEKLREIFGLYGQTTGKGNARPMEVFMCSVLKRQGYGEGFRWLSQYID...............................................`	198
6	-5.830	`sp\|Q9Y6B6\|SAR1B_HUMAN GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1`	`ali follow..`	11	30	`.......................................................................................FLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMT--GHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMF--GLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYID...............................................`	198
7	-5.760	`sp\|Q969Q4\|ARL11_HUMAN ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1`	`ali follow..`	12	17	`.......................................................................................MMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFL-----------------------------------VLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEG.......................................`	161
8	-5.630	`sp\|Q9Y4G8\|RPGF2_HUMAN Rap guanine nucleotide exchange factor 2 OS=Homo sapiens GN=RAPGEF2 PE=1 SV=1`	`ali`	11	119	`.........TDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLDGEELDSWSVILNGSVEVTYPDGK-----------AEILCMGNSFGVSPTKGVMRTKVDDCQFVC-IAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT----RKGHIVIKGTSERLTMHLVEEHSVVDPTFIEDF......................................................................................................`	298
9	-5.630	`sp\|Q96GR2\|ACBG1_HUMAN Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo sapiens GN=ACSBG1 PE=1 SV=2`	`ali`	13	57	`.......................................................................................LVNQDAEGIGEICGRTIFMGYLNMEDKTCEAIDEEGTGDAGRLDADGFLYITGRLKELIITA---VPPVPIEEAVKMELPIISNAMLIFLSMLLTLKCTLDPDTSDQTDNLTEQAMEFCQRVGSRATTVSEIIEKKDEAVYQAIEEGIAARPYHIQKWAILERDFSIS--GGELGPTMKLKRLTVLEKYKGIIDSFYQ...............`	270
10	-5.620	`sp\|Q8TEU7\|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6 PE=1 SV=2`	`ali`	11	105	`CLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILDGQELDSWYVILNGTVEISHPDGK-----------VENLFMGNSFGITPTHGIVRTKVDDCQFVC-IAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGT----RKGHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTF...............................................................................................`	300

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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