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Query: gi|15604720|ref|NP_219504.1| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTESYVNKEEIISLAKNAALELEDAHVEEFVTSMNDVIALMQEVIAIDISDIILEATVHHFVGPEDLREDMVTSDFTQEEFLSNVPVSLGGLVKVPTVIKLast
1 -3.030PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;  ali follow..  12  1MKKEQFEFNELP-YPTLARFGLTQEMIEDLLCILKEIGK............................................................. 39
2 -2.940PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795;  ali follow..  9  204.................ADLVWPNWQARALYIDFWMLGDAARELPDNSWQKHRARELGN--LVMNMFDPEDVSTVDKCRKFLQKE............... 269
3 -2.930PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  18  35PTPEQMMQMQTNQMVR--ALMLDDATAAKFTPIYEKYLKELRECRM...................................................... 78
4 -2.870HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  13  1MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVL----FESNGIYM--QVIN 94
5 -2.690PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali follow..  19  14.......QREIRTVGLMIALYEKRHPETDASTQYNDLFSYAIK......................................................... 49
6 -2.390PB034180 _Gut.Meta.Jp.0112129_ gi|163310377|dbj|BABD01000320.1||2 (+ 509:1679~0 complete)  ali follow..  7  1MNKLQIYTNDWLKIHPYTAVQPSDSYFVNLSNKLYGAC---------TLTTLPDIFRKKLGMYIAAYLEDQISE.......................... 65
7 -2.280PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  14  33.AKKEREQAVIARLIDIAQQEYRSLHHGMYTEHFDTLIDFVKN......................................................... 76
8 -2.270HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  14  98VAKNYMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDF..................................................... 144
9 -2.140HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075;  ali follow..  8  42..........YFIVKPTNISVLSESSVGARIYALMTVLKGVAEIERESFEDNKRFLKSQMEQEENPVIRRLLEQDQTHLDRIQVQMATAREFLIM..... 132
10 -2.080PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  15  18LASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAA............................................................. 56
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.