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Query: gi|15604725|ref|NP_219509.1| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKVLFHTMTLFGHLLSTPIYIVGDACGKDRDEYKNPPLRAFSFESQFLQIENAKFKTLPDQSLRYRQADTSLFATIPVTEMSGFLLSSRYLGAEVSWKSSKELQDTDLQAVGYFAFQDKSFYQYITLSVGAYTLALTNWQWSVLFSGMVDPENIEIGSGLYQVVLSSKYHASESLSVIMGVINEVGLHDKQAWPLLGFSYKPEDRLTLNCIYPVNFSAEYQCTPVCDLGVAYRLTRLRKKFPKNSLATSEGIFEYSGREIEGNIKLIFWPGQSLKMFGGYSVGNDISLANAHNEDEKIYKFGSSLFFGASANLHFLast
1 -10.700PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;  ali follow..  10  1MKVKTSILLLLMIATALPSFGGNGNGNGTDSLQATRYVTRATMYGVGYTNVFDTYLSPQEYKGIEFRISRETMRMTTLGDGNVSVQNFFQANLAYTHNRVDNNNTFAGLVNWNYGLHYQFRITDNFKLLAGGMGDFNGGFVYNLR---NTNNPASARAYINLDASGMAIWHTNYPLALRYQVN----------LPVIGV..................................................................................................................... 189
2 -6.900PB019827 gi|67919427|ref|ZP_00513005.1| conserved hypothetical protein [Chlorobium limicola DSM 245]gi|67782966|gb|EAM42367.1| conserved hypothetical protein [Chlorobium limicola DSM 245]  ali follow..  2............................................................................................................................SVSWIAGAEYQLFKKVNLLLA-DYAEGYYSPFAGAFA---------ERGDGGSNERGV-------------YLGIDAALSSKVSVGAGYDTRFFLDWKQSRAVTWTLQLQHKEKEVALKQCPDGAGSCDEEEELYAPLGKVTDRVRLDCDIDALRKLTLRTRGEVKRVVKEYLAGDESCYGWLVYQQAGYK. 191
3 -6.440PB001232 gi|126647001|ref|ZP_01719511.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi|126577049|gb|EAZ81297.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]  ali follow..  315.............................................SVNRIRKSFNIEPELRYGFSSNKFYGKVDFRWSTTKPIS-TFGIEGGKYIYQFNGGDPINEQVNAFYSLLFRQNYMKLYEQEAKIYWAHRVNYG--FTYRGNLTYANRHQLFNNINYSWYNKEGREYTPNQPENVETDDQAFADHDILKLNASIEWRPGVKYGIR-------------GRKYPITSNSPLIKLSYNKAFGGISNSESSADFDQIEVGIEHYFEFGGKFDFNVSAGTFLSNKYQHFGGNRTIFSNFGPASNYYVSGIFHYQF 594
4 -6.150HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  1MKKLLLAMIAVAALISFAAC--DHNETYADQRDRELDSINAFLRNENIKVINEAEFETDPNNNEYVLFESNGIYMQVYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLLANTYNSSYYGTVSATVPSGWLIPFTWIKVGRLITADDELAHVRL----LVP-----HTYGTTSASASVYACLYDIRFQAAR........................................................................................... 238
5 -5.380PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  1MKRNYFFTMLAAVLLAVAGANAQESAEFRPAELAGI-----WQLCHYVSEIPDVPGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGYG----TYQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIG........................................................................................................................................................................................... 120
6 -5.200PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  12  1MRKLGFTLVAALAFSVSAFANNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVAS.................................................................................................................................................................................................................................................................. 58
7 -4.590HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679;  ali follow..  12....................................................................................................................................................................................................YEFRYQLMHGL---ISLRAALGMDYCDSRNLYAVVNAQAAYKCMALTTHRPTLYGETLALGEDLHDIALTYF-KKRFSLTLAMNNPFMDNYRIGCENWNRRAGNT-ETSRMLLVKVTYGM 145
8 -4.160HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali follow..  4........................................................................................................................................................................RLNTNKQFMVGNGILAFAVIFVVVIFVYMSMRLQQQKA-------------NRNFIETYTITLTKGFAGDSTSIFINDSLLVNRTMTEEPFI--LEVKRFAEQSALMIVNNATEKLSLFELSEQGGEYRFEKEGEEVKPTGAGIK... 134
9 -4.050HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  13  1MKTLKITFVMLMTALFLVLPSCSKDDVNVTLTP---SEEVVNAFQQKYPDVKNVKWEILVG............................................................................................................................................................................................................................................................... 58
10 -3.960PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali follow..  1MKIKFLSFIASFFMVSFVITSCLDDDN-------------------NIEYSPDATIHAFALDTAGLGSYKFTIDLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLR-----------------------EPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDP----------SLRWNHVGK-EQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTDGVA.................................. 238

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.