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Query: gi|15604728|ref|NP_219512.1| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLFKRLRTGGKILVDHLVYGLGLGVLTILRLLPRSSLRLFSKGLGTALFYFISDVRKTALTNLALAFPEKSFAERYQIARQSVQQMIITFVELATVDKFAKHIDEMIAIATSEDAPEGFFPEEVSSQQELDHFFSRLDRQEGAILFCGHQANWELPFLYITKRYPGLAFAKPVKNRRLNQKIISLRESFQGKIVPPQNAINQALRALHRGEVVGIVGDQVLLSSEYSYPLFGSQAFTTTSPALLAYKTKKTVIAVAIYRKPNGNYLVVPSKAFHANTELSIRESTEQLMDRLMRFLEKGITCKPEQWLWLHKRWKRKLRHKFKRRYAFSHILIIVKGTSLQALQRFLIEFGEFYADASLSLAIIGAADTVLANSFAPYSLQFFSSEEELLAAPNFFPAIVDLFGLSRKTRLHYKRTGSRKIFTRNELKDSLLQKQSLIQSFHKLLRRVDTRSRKGLast
1 -4.440PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  8  17...........................LLFACPIIFASIMKEFIGRTAKSLSLALAIFSGCIFGSVLPAWSQEIVAGELERCFLAMPESVLPIV---------TMEERNDLCRRAGHLSGFTHTASLESSLGGTVTFLLNRNFIRITSTVGEVFMRILPFSDSSSVICVVTTVLHPVADSRIDFYTTEW---------------KPLKTDRFWQQPRIED---------FFLPHTDRQSYAYQAIYASLTPSYMQVSLSEESDTLSIRQTVT-------------ETLAEEEKPLAAIFLSPEPLVYRWQSGRFVRQ.......................................................................................................................................... 262
2 -3.880PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  7  9....................................................................................................................................................................................................EAHFKRYIKEHVKGKKTGLFITLGADPAGEHGE------SMLKVGRELLNEGGNEILAEFICQ---GAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQA-STHPDE..................................................................................................................................................... 108
3 -3.780PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  5  9.........................................................................................................................................................................LQKAAGEGMDEFIQVFTDKYKEVI--GGELTAETMPLLTGEQHSLLAYQRDEVMFGGFCQLIQNGNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMADDLEEEYLDIEEEVTALVASYVDDHLELFA................................................................................................................................................... 162
4 -3.560PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  14  1..................................................................................................................................................................................................................................................................................................MLRRSVPKSIWRTPRKWVW-RRSWSKPPSGNLPKSGETRKQPTIKNEEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDMLCGNWESVE.................................................................... 109
5 -2.920PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  6  3...........................................IGPC---------SIPTGEFLVGDPYLGSKYEKEYFQKIPTGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYF---EEAMKGIEDLKDINEGDFFGFNVDAGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPIFQSGFGDGAYPVYLAYDKD-----NVCQLIVELIDI.......................................................................................................................................................................................................... 198
6 -2.830PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;  ali follow..  11  102.........................................................................................................................................AKVWQAIMFEDTQGDYDYNDLII--HVKNTASNHAYQHPTETWQTIEIQPIALGSTKTIKLGCI--LSDGSTHMISDDVRTDLFGGRQGFINTVNDNDPIRYKLASTNIKNYAMPKKEKTSAAWVAWFIEVDGKRMYAASSDIDYKSVSNGNGTFSYPQEKNLFEYPGFSDWINGKVSSIGSFQKELVYKYCSGGIIGEDGKSHKIWDYL............................................................................................................ 324
7 -2.250PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  8  1...........NLITAILFILFIMAYFICLWVNSPNIIRDIKKS-TLSVNVNQDLDEEDILDENIEKPVSSTTSISAKLGTVFSKTESVINESIPGRLSLIDWNGLAQRILQKRMIPESNDNNTVYKMDNGQLTYTYPDIGVRIAHKN-----VLDKYLKSVGTKLLYVQAPYKVNRDNNQLDKLLEGLNKLKIDYIDFREVFANNFLDYPSLFFNTDHHWTTEAAFFAY................................................................................................................................................................................................................................. 231
8 -2.170PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  8  43.................................................................................................................................................................................FTAMQGEVVATPQTRVSDYDDTDGKHKSKWDGGEVIGVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYGW-------------YPNTADISLTGQDNTGNKFPYVLKGVSSKQYSYKENVQLLEHQLVK---------------RVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLATRKVGDYYTAMLAPDTKTSNNFVKIEVYGLTYYYNPDIELVKGTVYTYTV.................................. 260
9 -2.170HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  6  2.....................................................................................................QTNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLV----GSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIE----CANLLHTAEACIEWHAWYQNEENELQMDMIHIREGSRYDGYFEKVAQRISEIMTD-------------EIRETILRLKYETPETEKIIGVEYYQAVIRDGVRDYSGFKEWRKQHWM............................................................................................................................................ 202
10 -2.020PB015879 Q5LJ14_BACFN/120-411 PB015879; Pfam-B_15879;  ali follow..  10  1.........................................................VAWENDLTAFPALQETGERAFGYDIWYNTTEPVVEARYEGELNPDMKAKIAELGKTDPKAAQELYRSVSYHGLDCYKVGPTLGGGTTTVKLVYNPLVVKGDSTIIETRIITLDAGSYCNKTVVSYTNLKETMPLAVGIVLHEPDGAIVADAANGYMTYVDPTDNAGGDNGKIFVGAAFPTLVKEAKAVLFPEKEKKELRGGADGHVLAISEYEPDFTYYWGAAWSKADIKDSAAWNAYMADFAQKNP....................................................................................................................................................... 289
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.