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Query: gi|15604733|ref|NP_219517.1| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKTSVIDTSVLIYDPKALSSFSNTRIIIPFTVIEELESCAKFRDESGKNASRALGNIRVLLEQSERPSSGQILLKNGSELCIEVSPLVNLSNHKKQKKHLTLELLQIISQRESVVFVTKSLGRRVHAEALGIEAKDYENKCVSFQSLYRGHRKLKVANSTIEYFYKDGSIAFPSDLSPLPSPNEYFFLSGDSDNYSAVGRYSSKDNKILSLKPAPEKIWGVKPLNIEQRCALDLLLRDDIKLVTLMGQAGSGKTILALAAAMYQVFEKPKYNKLLVSRPIIPMGKDIGFLPGIKEAKLMHWMQPIYDNMEFLFDVNNMGDFSETLHSLMETKKLEMEALTYIRGRSLPKVFMIIDEAQNLTPHEIKTIISRAGKGTKIVLTGDPTQIDSLYFDENSNGLTYLVGKFHHLPLYGHMFMTRTERSELAAAAATILLast
1 -3.760PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  13  1....................................................................................................................................................................................................................................MQWVLTFVEMYGTYFIL-------GSFLLNLLLVLLLIIYNTTTSNL--------------LVKGTDGKNIESVLMQHIEKVEEA--QVEVEKVHKRLDIINNRMSFCIQKVGMVRGSDLSYSYALLDENNN-----ITGIYGRSETVAKPVKDG---KSNYSLSVEELQALQRAKEN............................ 165
2 -2.910PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  14  6....................................................................................................................................................................................................................................................................................................GGPEAHFKRYIKELFITLGADPAGEHGESMLKVGRELLNEGGNEILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHPDENDLKNARKAFEG................................... 120
3 -2.440PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  14  26...........................................................................................................................................................................................................................................................EGDTIPREFIDLEEVIERRRYLILR-----------------RKTRKVWPYLSELNARLASIKSKSERRKYTKIVQKYIEEQ--ELKKLTRTEGQILVK--LIHRQTGVTTFQLIKNLRSGWRDTTAGLFDIELKSEYNPVNNREDFLIEDILQRS........................... 185
4 -2.370PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  12  88.......................................................................................................................................................................................................................................ALGACMSRHVRCCFVVAPSASGKGILSYIRLLVEPIHDEIRKEVTIQMKAYKKEKAE-LISGNNTTGILQNIM-CEAEADTLSTGSDHGHWSDTLRKAFDHDRLSYN-------RRTDQEYREVKKSYSGTPSQVQTFIPTAEDGSRQLYY-DNEIDWEEIFTAMGLEWKEKLSVIKTHGIH-TLQLTDEQKEEIDTVFSDL. 343
5 -2.270PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]  ali follow..  11  13.................................................................................................................................................................................................................................NYAEFASVTELYTDEKGCVSIT--IGLGDIHIRAVKD-EAMGHVRTQEEITLILNDNLLSKD---------------VTDSWEMCEVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIES---YYDEALAENVPDAKEILHLAKGNFMEIY---------RFLTVDGNNVDSNQDRLALLKTLKVKDYKDVTASVLEDHLKVRE 196
6 -2.110HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;  ali follow..  8  33..................................................................................................................................................................................................................................................................................................IDENGKSRHSVWLSDVWQEVDAFYKLDNCPIRNEFAEKALR-GRLHAERTGAYLPRALQG---VLEGTLGVFGERLGRLLLKLAVEHNMTLLGGDMDMTRDEYSKMRGSSVREVSATHGT-----ISFKDVMVFY......... 164
7 -1.910PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  11  135.....................................................................................................................................................................................................................................EAIKEVSARRMISTYYLMGEGFSGAESGKMNLSLKQLCAMK--RHVFAGQNLYARGACYHSFDQGSFGRKPGFIAANAGLLTKDIYLRSVHKHAPQKLILAAAGTPWYSAVSRKA--------IIIDGQEQLI--TLDALPQRPPKTTKLLIETSFQSETDCHIRVTDMGF.................................. 311
8 -1.890HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  14  31.......................................................................................................................................................................................................................................................G-AGTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGA----------------TALSSIVAPGDPCEAASRVARANGAEVTTC------SVTGEDVVVEVSVEARVLGVSRPAVRAG............................................................ 137
9 -1.810PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  14  113...............................................................................................................................................................................................................................................QIKLAPVNAPYFDGAKLL-IAADCTAYAYASFHEKFIKGHVTLIG--------------------PKLDSVDYS----------EKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRIL...................................................... 223
10 -1.770HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  8  1.......................................................................................................................................................................................................................................MFEYILREIFLSVIAFLAGSAG-AFVLVIGVVPRILRCSRIENIILIENVMICGVVAGNISSVLDTAYN------------------GFANMPKVPVSNICGNIIIAIYGLCVGIFVGCIAVALAEILHTFPIIYKRM--KLRAGLGIIVIS................................................... 137
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;