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Query: gi|15604735|ref|NP_219519.1| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLIFALSFGADACLCAADLSKAKVEASVGDRAAFSPFTGEIKGNRVRLRLAPHTDSFIIKELSKGDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDNVIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALPKQCVFYVAKNFVKNVGALDLYNQKEGQKKLALDLLSSAMDFADAELQKKIEDIDLDAIYKKMNLAQSEEFKDVPGLQSLVQKALERVQEAFLAKSLEKSSVKVPEIRHKVLEEIAVVSPAVEETPVVTKTEEQKVTTVPVPAPAVVTEPAQDLSSVKGSLLSHYIRKKGFVKASPVIEGRESFERSLFAVWLSLQPEEIRHQLTMESFYRDEQKKKRVLTGELEVYPHIVKNNPGDYLLKNGEDVVAFVYATSIDLSKWLGKSVVLECVSRPNNHFAFPAYIVLSVKEGALast
1 -5.920PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  15  78.......................................EVTTDSVTMECLPIKDTYI--ALYKGDRVVVAEVDSVWVKLAHTQEEQGWIRETELKESFVPTDSIS------------------QAIHFFSDTHASYFMIIFALFVGVYLFRAFRRK.................................................................................................................................................................................................................................................................................... 183
2 -3.940HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  14  17..............................DRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGTEAKILSDVVAQAYLSGCMFNDPVGMAIYAELHYMMSS---------MLGEWFE...................................................................................................................................................................................................................................................................................................... 127
3 -3.090PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  10  264FEYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTYRDGYTNTDQIQEVVYNYPTA-AMNDHLTKIITQK-YIAQMPYQVLEIW--NDHRRLGLQQWDFYPQR--PTTLDN----ADPENYQKAVELLGGSW........................................................................................................................................................................................................................................................................................................ 436
4 -3.060PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  10  4..........................................................................HTWFECKIENGMQKKVTEPYLVDALSFTEAMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCKL----------IFITLDEKSGAEKKTSTQVLVQAADLRDAVKKLDEGMKGTMADYQIGMVSET..................................................................................................................................................................................................................................... 136
5 -3.040PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  16LLLFACPIIFASIMKKEFIGRTAKSLSLALAIFSGCIFGSVEIVAGELER--AMPESVLPIVTMEERNDLCRRAGHLSGFTHTASLES-LNRNFIRIQTSTVGEVFMRILPFSDSSVVTTVLHPVADSRIDFYTTEWKPLKTDRFWQQPRIEDFFLPHTDRQSYAYQAIYASL.................................................................................................................................................................................................................................................................... 207
6 -2.830PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  13  10.............LAAVLLAVAGANAQESAEFRPAELAGI------QLCHYVSEIPDVPGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGTYQLTDNSYKESIEKNIHDHKDNILEFEI-GDDGVMYLKYFIAKWKRVGMPAKFPEDL........................................................................................................................................................................................................................................................................................... 161
7 -2.770PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  15  331....................KHEVEEQQYKVRFEKIKDLEKTIDNYAFIV-PKQASDLL---TEGKALS----------V----GGSNYIKQHIEGKTTI----IFVRDKQDLEKSLYTEYKNGQIYQLRGKHNC-----DPTKDVQMAA-NKWAKLLKSKTKVLQN.......................................................................................................................................................................................................................................................................... 452
8 -2.740HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;  ali follow..  12  2...............................................LKENQG--YVIRRTILFDNQCGALGENSRW-QFNGQDGHRDYFWGHYMNEPDMAERDLLNRARPNSYFNRPVHMDLFTRQQVTGEIFQAWGAITYAHPLTEREMQDYRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGHRG...................................................................................................................................................................................... 247
9 -2.700PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  13  16.........................EKKNLRTDDGLRLEILSPGWWNNEEGPDFKHAEFKGLIRGS-VEIHVFASDWIH---HENQKTY-------DAVC----LHVVMWNDLKGRCVKN-FSGKVIPQI............................................................................................................................................................................................................................................................................................................... 110
10 -2.590HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  12  89...................EVYAISRDATPAPKKVSNVKDCSASDVTLQLSAASQ-----SVPVGGTATIVHEGSGNYLVDGSDSGRVLT---------ITSGQETIKSDVCPADSRLLLMAKGDKDVQ------TWNTNANATL................................................................................................................................................................................................................................................................................................ 201

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.