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Query: gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVKINDQFICISPYISARWNQIAFIESCDGGTEGGITLKLHLIDGETVSIPNLGQAIVDEVFQEHLLYLESTAPQKNKEEEKISSLLGAVQQMAKGCEVQVFSQKGLVSMLLGGAGSINVLLQHSPEHKDHPDLPTDLLERIAQMMRSLSIGPTSILAKPEPHCNCLHCQIGRATVEEEDAGVSDEDLTFRSWDISQSGEKMYTVTDPLNPEEQFNVYLGTPIGCTCGQPYCEHVKAVLYTLast
1 -9.130sp|Q13233|M3K1_HUMAN Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4  ali   20  4.........................................................................................................................................................................................NKVMRARLYLLQQIGPNSFLIGGD-SPDNKYRVFIGPQ--CSCARGTCIHLLFVM.. 57
2 -8.700sp|Q9UBI9|HDC_HUMAN Headcase protein homolog OS=Homo sapiens GN=HECA PE=1 SV=1  ali   21  30....................................................................................................................................................................CNNEHCPCSTWMHLQCFYEWESSILVQRSWNEKQCRQNMW--------TKKGYDLAFRFCSCRCGQ............ 94
3 -8.150sp|Q9HCJ5|ZSWM6_HUMAN Zinc finger SWIM domain-containing protein 6 OS=Homo sapiens GN=ZSWIM6 PE=2 SV=2  ali   25  37..................................................................................................................................................................................................AIQSEPETVCNVAISFDRCKITSV------TCSCGNKDCAHVVALS.. 79
4 -7.560sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2  ali   28  1............................................................................................................................................................................................LPFRR-NVLQVGFHLSGTVTASEPAVTYKVAI-TSVTCGCGNKDCAHVVALS.. 75
5 -6.640sp|Q9H7M6|ZSWM4_HUMAN Zinc finger SWIM domain-containing protein 4 OS=Homo sapiens GN=ZSWIM4 PE=2 SV=3  ali   14  7..................................................................................................................SAKRVAESWAFEQVEERFSRVPEPVQKRICMYSSLGYPPPEGEHDARV--------PFTRGLHLLQSGAVDR-SGNIREPGSPGEPERLYHVSISFDRCKITSV-------CGCDNRDCAHVVALS.. 140
6 -6.550sp|A6H8Z2|CI128_HUMAN Uncharacterized protein C9orf128 OS=Homo sapiens GN=C9orf128 PE=2 SV=2  ali   13  5..........................................................................................................................................................................EVAKAMHREEFGAQVNNLFQWEKDAALNAIQTGLYIGWRCPHYLWDCFRIGDESRCFCGHLLREH....... 69
7 -5.320sp|Q9HCF6|TRPM3_HUMAN Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4  ali   16  19............................................................................................................................................................................IRKLCHAAFLPSVRLLKAQKSW-----------IERAFYKREHIIPSTKDPHRCCCGRLIGQH....... 72
8 -5.240tr|O75294|O75294_HUMAN Chromosome 19 open reading frame 15, isoform CRA_e OS=Homo sapiens GN=C19orf15 PE=2 SV=1  ali   21  2.....................................................................................................................................................................DFQECTWQVVLNEFKRVGESGVSDSFFEQEPVDTVSSLFHVDSPIDPSEKY---LGFPINYSCEEKPSEDL...... 75
9 -5.200sp|Q8NEA4|FBX36_HUMAN F-box only protein 36 OS=Homo sapiens GN=FBXO36 PE=2 SV=2  ali   22  28.......................................................................................................................................................................................VTRSQVIFRWWKISLRSEY--RSTKPGEAKETHEDFLQGQTALIFGARILDYVINLCK. 88
10 -5.080sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1  ali   21  1............................................................................................................................................................................................MSQKSW-IESTLTKVYIIPSSKDPHRCLPGCCQQLVRCFCGRLVKQH....... 51
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.