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current user: public |
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Query: gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 | |||||||
# | Score | Template | Links and tools | %id | First | MKVKINDQFICISPYISARWNQIAFIESCDGGTEGGITLKLHLIDGETVSIPNLGQAIVDEVFQEHLLYLESTAPQKNKEEEKISSLLGAVQQMAKGCEVQVFSQKGLVSMLLGGAGSINVLLQHSPEHKDHPDLPTDLLERIAQMMRSLSIGPTSILAKPEPHCNCLHCQIGRATVEEEDAGVSDEDLTFRSWDISQSGEKMYTVTDPLNPEEQFNVYLGTPIGCTCGQPYCEHVKAVLYT | Last |
1 | -8.780 | 1jpy_A mol:protein length:137 interleukin 17F | ali model follow.. | 16 | 2 | ................................................................SHMRKIPKVGHTFFQKPESCPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNR-----YPSEV---------------------VQAQCRNLGCINAQG----------KEDISMNSVPIQQETLVVRRKHQ--GCSVSFQLKVLVTVGCTCVTPVIHHVQ..... | 137 |
2 | -8.690 | 5n92_F mol:protein length:139 Interleukin-17F | ali model follow.. | 15 | 2 | ..............................................................FRHDSRKIPKVGHTFFQKPESCPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNR-----YPSEV---------------------VQAQCRNLGCINAQG---KEDISMNSVPIQQETLVVRRKCSVSF-------QLEKVLV----TVGCTCVTPVIHHVQ..... | 139 |
3 | -8.100 | 4qhu_C mol:protein length:132 Interleukin-17A | ali model follow.. | 17 | 2 | .....................................................................ITIPRNPGCPNSEDKNFPRTVMVNLNIHNRNTNTNPKRSSDYYNRSTSPWNLHRNEDPER-----YPSVI---------------------WEAQCRHLGCINADG----------NVDYHMNSVPIQQEILVLRR--EPPHCPNSFRLKILVSVGCTCVTPIVHHVQ..... | 132 |
4 | -7.970 | 5hhx_A mol:protein length:138 Interleukin-17A | ali model follow.. | 25 | 62 | ................................................................................................................................NEDPERYPSVI---------------------WEAKCRHLGCINADG----------NVDYHMNSVPIQQEILVLRR--EPPHCPNSFRLKILVSVGCTCVTPIVHHV...... | 137 |
5 | -7.870 | 3vpi_A mol:protein length:174 type VI secretion exported 1 | ali model follow.. | 12 | 16 | ........................................................................................................................................DSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGQSWTKLASGAEAAQKAAQ-----------GFLVIAGLKGRTYGHVAVVI.. | 110 |
6 | -7.720 | 4eqa_A mol:protein length:146 Putative uncharacterized protein | ali model follow.. | 11 | 3 | ...........................................................................................................................................MQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGQSWTKLASGAEAAQKAAQ-----------GFLVIAGLKGRTYGHVAVVI.. | 94 |
7 | -7.670 | 4fgd_A mol:protein length:165 Tse1 | ali model follow.. | 12 | 2 | ........................................................................................................................................DSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGQSWTKLASGAEAAQKAAQ-----------GFLVIAGLKGRTYGHVAVVI.. | 96 |
8 | -7.600 | 5c9v_A mol:protein length:330 E3 ubiquitin-protein ligase parkin | ali model follow.. | 16 | 172 | ......................................................................................................................................LGEEQYNRYQQYAAEECVLQMGGVLCPRPGCGCRECKEAAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCKCPQPQCRL....... | 308 |
9 | -7.590 | 5caw_A mol:protein length:321 E3 ubiquitin-protein ligase parkin | ali model follow.. | 15 | 169 | ......................................................................................................................................LTDAQYEQYHRFATEEFILQAGGVLCPQPGCGCGKCPTDVPFLSQNCDYPLDPEKLEKARWDEASSTVIKVLTKPC---PKCRTSTERAGGCICTRANCGF....... | 300 |
10 | -7.490 | 4eob_A mol:protein length:162 type VI amidase effector Tse1 | ali model follow.. | 12 | 2 | ........................................................................................................................................DSLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGQSWTKLASGAEAAQKAAQ-----------GFLVIAGLKGRTYGHVAVVI.. | 96 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |