FFAS03 results for 15604724

Query: gi|15604724|ref|NP_219508.1| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 .`
#	Score	Template	Links and tools	%id	First	`MPSTVAPIKGQDHFLNLVFPERVAAAYMSPLAQKYPKAALSIASLAGFLLGILKLITFPVLCAAGLFVFPIRGLISCLFHKSFQGCSGYVLATFLSLFSLALTIVGIVSCITWAPGFIFPMISVSIAFATVETCFQIYTHLFPALEHKPSSSLKIEIAAAKLPRSSSAPDLNYPSLPTQSASPSQRFSA`	Last
1	-105.000	`PF17459.2; Y006_CHLTR/5-157; Family of unknown function (DUF5422 topsan)`	`ali follow..`	100	1	`....VAPIKGQDHFLNLVFPERVAAAYMSPLAQKYPKAALSIASLAGFLLGILKLITFPVLCAAGLFVFPIRGLISCLFHKSFQGCSGYVLATFLSLFSLALTIVGIVSCITWAPGFIFPMISVSIAFATVETCFQIYTHLFPALEHKPSSSLKIEI................................`	153
2	-8.920	`PF15681.5; H0WG11_OTOGA/29-376; Lymphocyte activation family X`	`ali follow..`	21	9	`...............................................................................................SIFSLAILLFVAVFCILWS---VMPILTLPQSRQRAKNIYDLLPRRQQELGRLQSRNTRIFSTESLLSRNFDSPG----HVYFEADSASQVRQA`	115
3	-7.720	`PF04217.13; K7AZH1_9ALTE/5-145; Protein of unknown function, DUF412 topsan`	`ali follow..`	15	21	`..............LYGMLPECRVISATKFSIKVMPALAV-LTVVALINLQGYDKLPQALATGVFFLSLPLQGLM--LGHRSNQSLPPALKSWYFDIHHKMQIQGCALQSAKANPDYKELARLLRTAFDELDKAF......................................................`	139
4	-6.990	`PF16316.5; D7B090_NOCDD/9-176; Domain of unknown function (DUF4956 topsan)`	`ali follow..`	12	38	`........................................................................................SMLTNQEVGLAVGFGLFGVLSILRLRSDYYFTAIALGLVNAVAAPMPWV....................................................`	94
5	-6.660	`PF16625.5; G3QT31_GORGO/409-473; Unstructured linking region I-set and fnIII on Brother of CDO`	`ali follow..`	16	21	`..............................................................................................................................................PVSPSKLGNPEQMLRGQPALPRPPTSVRPASPQCPGEKGQGAP....`	63
6	-6.620	`PF03620.13; VEMP_IBVB/1-92; IBV 3C protein`	`ali follow..`	17	1	`......................................................................MNLLNKSLEENGSFLTALYIIVGFLALYLLGRALQAFVQAADACCLFWYTWVVIPGAKGTA-----VYKYTYGRKLNNPELEAVIVNEFPK............................`	87
7	-6.600	`PF12409.8; G1XUG4_ARTOA/163-285; P5-type ATPase cation transporter`	`ali follow..`	15	6	`....................................................................................IVGGFRTSKMGSTILTVLSVLGLFYLLLWMPRWRVRLIGKPCPLRDCEWVV......................................................`	59
8	-6.330	`PF04020.13; R4PXK2_9BACT/2-110; Mycobacterial 4 TMS phage holin, superfamily IV`	`ali follow..`	21	34	`.......................................VAVFLLAGLIFSVVNAILKPIV---IILALPAILLTLGLFTIIVNGFMVWISLKLAPLTGLVLSLVNYV.................................................................................`	109
9	-6.180	`PF06781.12; D1BI18_SANKS/1-89; Cell division protein CrgA`	`ali follow..`	17	14	`...................SSAQASAPKVKQVREGNPAWLVPTMITMFIVGILWVVLFYLTSGGAQLPIP--------------------IGRWNILVGFMILLGGFGLSTRW............................................................................`	88
10	-6.170	`PF06297.14; W4Z4N6_STRPU/592-676; PET Domain`	`ali follow..`	15	3	`..............................................................................................................YTWIPP------------GLKPDQVHRYFCSLPDDKVPYVNSTGEKFRIKSLLQQLPPHDNECNGLGEDEKKELRMFSS`	72

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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