FFAS03 results for 15604736

Query: gi|15604736|ref|NP_219520.1| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MQHAHNTDSLPAWDCLQHNYLRRNALTSFCSYVPILSTVVGIRTLYNMRKLHTAFVQRTGGFLCQNDPNIPCDKFPCSIIRKEWPQVHTKAMQEVFGIKALVCLGSLILKIFRAVKAFFHRTFSPSLLPEQDTSIQLPDSPQSGIPEETLLETPRSS`	Last
1	-7.330	`PF01594.16; Y338_HAEIN/10-332; AI-2E family transporter`	`ali follow..`	6	214	`................VQYAILWATLSFLLNYIPNIGSIIAAGIGFGVAIGVIAINMVVGNIIEPKMMGQRLGLSTLVVF------LSLLFWGWLLGTVGML-LSVPLTMALKIALESS......................................`	322
2	-7.060	`PF13065.6; A7GS49_BACCN/1-95; Protein of unknown function (DUF3928 topsan)`	`ali follow..`	15	18	`.SYVKVVQGVENVYVEVGEPLYEHPLMKFYVHIAIQATYDNEKALKEIARL-----VELGRFTYVHYRNE--------EIEQAFEAVKYESF.................................................................`	95
3	-6.680	`PF07277.11; Q2G8U0_NOVAD/19-238; SapC`	`ali follow..`	16	5	`.DHAANADAAPWLIGQHAIPLTAEEFPQAARHYPIIFASGD--ALMGLNEGVNVFVDEDGKVTQPVYIPAYVRRYPSLCFDPSSGLIGDSVDGVEL-TKAALGFCEQFEQAGQRTQAFIDELKKHDLLMEGEVAIQQQGNEQP..............`	174
4	-6.420	`PF06455.11; Q8LWR9_ODORR/422-602; NADH dehydrogenase subunit 5 C-terminus`	`ali follow..`	8	44	`........GYLMFYSIPPTTVPQTTMPHYLKLTALVVTLLGFIVALELTTTSHKLKFKYTSNL-PAIIHRFMPSIGLSTSQKLAFTLMDSTWLENVLPKSISYFHMKSSTIISNQKGLIK.....................................`	164
5	-6.140	`PF03021.14; MAT_INCAA/236-374; Influenza C virus M2 protein`	`ali follow..`	18	1	`...............................................MGRMAMKWLVVIICFSITSQPASACNLKTCLKLFNNTDAVTVHCFNENQGITMLYLLVKIIIELVN............................................`	78
6	-5.740	`PF14576.6; B9GIM3_POPTR/32-317; Sieve element occlusion N-terminus`	`ali follow..`	15	93	`..........................ATTVSLFNMLTSYSDAKLVLTLA----AFALNYGEFWLLAQIYSSNDLAKSMAILRQLPSIMEHSGPLKPRFDAINNLIKVMMDVARCVVEF.......................................`	181
7	-5.720	`PF02654.15; K8GFP9_9CYAN/25-259; Cobalamin-5-phosphate synthase`	`ali follow..`	15	18	`.........................FSGIARWAPVIGWVIGILLGL-RSALIVTSWVAITGGLHLDGAMDTADGLAVLEPERRL-DVMADSRSGAFGVMAAVIILLLKTTALASL..........................................`	119
8	-5.710	`PF17345.2; D8MXC6_ERWBE/2-107; Family of unknown function (DUF5375 topsan)`	`ali follow..`	11	13	`....................LYRRAVAC--AWLTLCHE-QKRYASLTLARLEHAIETELEGFYLRQHGRQRGQEIACALLADLMAALKAAPCLSFLGQVVMDELCGRLKD...............................................`	101
9	-5.620	`PF06426.14; G2IV90_PSEUL/9-113; Serine acetyltransferase, N-terminal`	`ali follow..`	9	6	`......................FKEAEAAAQAEPLLASFLH-MTVLRHDTLEDVLAFHLSSKLSSPVMDARALMELFREALAADPVIGQKMRADIVACYDRDPACEGYSIPLLYFKGF.......................................`	100
10	-5.320	`PF10409.9; FH12_ORYSJ/197-337; C2 domain of PTEN tumour-suppressor protein`	`ali follow..`	11	1	`...............IQPIPFTLDCV--ILREVPNFDGVGGCRPIVRVYGQDFLTVDKRCNVMLPPSKPRKHARRYKQQADNISVKLNVGSCVQ-VVLECLHIDDSLEDERLMFRVMFNTYFIQSHILPLNFENIDVSWDAEQRFTKKFKAEVLFSE`	141

FFAS is supported by the NIH grant R01-GM087218-01

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