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Query: gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX], from C.trachomatis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVKINDQFICISPYISARWNQIAFIESCDGGTEGGITLKLHLIDGETVSIPNLGQAIVDEVFQEHLLYLESTAPQKNKEEEKISSLLGAVQQMAKGCEVQVFSQKGLVSMLLGGAGSINVLLQHSPEHKDHPDLPTDLLERIAQMMRSLSIGPTSILAKPEPHCNCLHCQIGRATVEEEDAGVSDEDLTFRSWDISQSGEKMYTVTDPLNPEEQFNVYLGTPIGCTCGQPYCEHVKAVLYTLast
1 -8.400[S] COG5431 Uncharacterized metal-binding protein  ali follow..  18  2..........................................................................................................................................................................PLPSEVEKAARSGSEYELYK------LSFGKRGDKAFEYLKRSKVKRYYVVEGGFCTCGKSPCAHIIAV... 86
2 -6.660[S] COG4715 Uncharacterized conserved protein  ali follow..  9  1................................................................................................................................MSGKPKLDLIFIYAQVFA-------------------GDRSMSLPQISEFTVRRYANAKSFQFEAGAVTTITQRGQQLQAEVEGNERLPYRVSLNFDCTCAYNLCKHIVATM.. 109
3 -6.430[O] KOG0006 E3 ubiquitin-protein ligase (Parkin protein)  ali follow..  22  279......................................................................................................................................LGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGCRECAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPC---PRCHVPVEKNGGCKCPQPQCRL....... 415
4 -6.180[M] COG3040 Bacterial lipocalin  ali follow..  11  34.........FDAKRYLGT-WYEIARLDHRFERGLEQVTATYSLRDDGGINVINKGYN---------------PDREMWQKTEGKAYFTGSPNRAALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYSRTPTLSEEIKQQMLAVATREGFDVNKLIWVKQSGS............................................................................. 177
5 -5.860[C] KOG2958 Galactose-1-phosphate uridylyltransferase  ali follow..  9  117.......................................VICFSPNHNLTIPQMKQSDLVHIVNSWQALTDDLSREARENHKPFKY----------------------VQIFENKGTAMGCSNLHPHGQA-LESIPSEVSQELKSFDKYK-----------REHNTDLFADYVKLESREKSRVVVENE---------------FIVVVPYWAIWPFETLV...................... 251
6 -5.650[S] COG3791 Uncharacterized conserved protein  ali follow..  18  43...................................................................................................................................................................RCNCSSCLKTRFWKVFVTPE---------DFSLLSGEEALAEYRFGERMIRHV---------CHCG............. 92
7 -5.570[I] KOG2818 Predicted undecaprenyl diphosphate synthase  ali follow..  7  61.......QLTKTPQHLVL-------VISPVDAGVDAVLLSRIFDFALDVGIKHVSLYDRRTKGRGYVDMADLCRSTNADTGSCLKWPPVASPSKLENQPKNGQKTNGYVNGSHSPQLQLHQISASDGH--------ALIADVCRELYEDSKTELVQSLLKQKREAL----QISDMLSKRLGFEAPEPELGLLPWHARFT--EFHTHPSGRHFDVE........................... 260
8 -5.530[R] COG0727 Predicted Fe-S-cluster oxidoreductase  ali follow..  11  3.............................................................................................................................SVKNNPIETRLTEVREELRDLKNFPDSKFVGIIKELGFRCLCARC-----------TKEFNDHVFLLDSDLEIIKQIDPYAVTPA-ENKRCRIYESRPSIC................ 123
9 -5.510[S] COG5466 Predicted small metal-binding protein  ali follow..  13  24......................................................TEDELLEMLKIHAKSSHGVTSIPPDLLNKIKQNIKKVGKYYFSCASVGMNCGFEIMGAQSEQELLDELAVHAKMSHGMSSIPQDTLNKIKQNIKVM............................................................................................ 119
10 -5.430[R] COG5048 FOG: Zn-finger  ali follow..  11  513.............................................................................................................................KEINTYTTNSPSKITRKLTTLPRGSIDKYVKEMPDKTFECLFPGCTFKRRYNIRSHIQTHLEDRPYS--------DKAFVRNHDL--IRHKKSHQEKAYACPCGKK--VHRSRMICS 633
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 0 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang B, Jaroszewski L, Rychlewski L, Godzik A. Similarities and differences between nonhomologous proteins with similar folds: evaluation of threading strategies. Fold Des. 1997;2(5):307-17.