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Query: [J] COG0268 Ribosomal protein S20, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGNKNAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIALast
1 -53.200[J] COG0268 Ribosomal protein S20  ali  100  1MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGNKNAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA 87
2 -6.740[J] COG0752 Glycyl-tRNA synthetase, alpha subunit  ali follow..  14  213.......................LLENFDKFEKEAGRALEEGLVHPAYDYVLKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVA 276
3 -6.650[KT] COG3835 Sugar diacid utilization regulator  ali follow..  11  291.................PLNEGWQGEQWRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITG... 357
4 -5.830[TQ] COG2508 Regulator of polyketide synthase expression  ali follow..  15  506........................VSDVRSFVRESIGAMAEHDREHQTPYLETLSVYLQACADRMGLHVTTLRYRLARIQELFG... 571
5 -5.710[S] COG4838 Uncharacterized protein conserved in bacteria  ali follow..  12  2............SAETVTGHNEKAYALLKSDAEKIRKLIEVQ-EEVLDTQMFGLSREIDFAIRLELIDEEQGKQLLSELERKLADL. 86
6 -5.570[U] COG5030 Clathrin adaptor complex, small subunit  ali follow..  10  88...........................IQVFVEALDRCFNNVCELDLVFKFQEIHAILAEVVSGGLVLETNLNEIVLAAQNQ..... 142
7 -5.380[U] KOG0935 Clathrin adaptor complex, small subunit  ali follow..  14  84...........................IHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLML..... 138
8 -5.140[S] COG5328 Uncharacterized protein conserved in bacteria  ali follow..  16  86.........................TPLRRIVKDYYMICES---DAIRSSTPSHIEAIDMG--RRGLHNEGSQTLMDRLSGKID... 141
9 -5.040[S] COG1849 Uncharacterized protein conserved in archaea  ali follow..  19  14FSIEEEALKKIRISPAEGSFLRKIAEDNMQMILSYYS-YAKGDLINAFAALNYSYGWIDAGVRLGIFD................... 85
10 -4.970[U] KOG0936 Clathrin adaptor complex, small subunit  ali follow..  9  90...........................IQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQ..... 144
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13.