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Query: [U] COG0690 Preprotein translocase subunit SecE, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MALEIEKKKNAHEVENQKSKGLNRFLWLLVIVVIATAALGNIYFVEQFSTPIRVVGVVVLLLIALGLAALTNQGVKARHFFSESRIELRKIVWPTRPEAMQTTLIVAGVTIVVSLILWGLDSVIVALITFLTDLRFLast
1 -88.900[U] COG0690 Preprotein translocase subunit SecE  ali  100  1MALEIEKKKNAHEVENQKSKGLNRFLWLLVIVVIATAALGNIYFVEQFSTPIRVVGVVVLLLIALGLAALTNQGVKARHFFSESRIELRKIVWPTRPEAMQTTLIVAGVTIVVSLILWGLDSVIVALITFLTDLRF 136
2 -9.750[U] KOG3498 Preprotein translocase, gamma subunit  ali follow..  14  11............................................................................GRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIPINNIIVG... 67
3 -6.740[NU] COG4967 Tfp pilus assembly protein PilV  ali follow..  15  1..MSMKKRSNRRCHWAAPPLGVSLIEVLIALLVLGVGLLA----------------FALLQTMNVRFTKSAQQRTIASNLAYELLDIMR............................................... 71
4 -6.440[U] COG1314 Preprotein translocase subunit SecG  ali follow..  14  3.................................................EALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTAVLATLFFIISLVLGNI................ 73
5 -6.320[P] COG1230 Co/Zn/Cd efflux system component  ali follow..  14  61MAVHFSQRKPDPRHTFGYLRLTTLAAFVNAAALLLIVILIVWEAVHRFFSPHEVMGTPMLIIAIAGLLANIFCFWILHKGEEEKNINVRAAALHVLSDLLGSVGAMIAAIVILTTGWTPIDPILSVLVSVLI.... 192
6 -6.040[C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit  ali follow..  16  1....MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEAMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWPIAQAAMFGYFLMSVFMIITGFALY.................. 151
7 -6.000[U] KOG3103 Rab GTPase interacting factor, Golgi membrane protein  ali follow..  9  167IFFYCLLSLMVSRSQVTFGAVASVLGYCLLPMVVLSGI----------NILITIQGTLGLIVSGISIFWCAISASKLFATAFSMDHQQLLIAYP--------CAVLYGGFALITIY.................... 264
8 -5.960[S] COG4907 Predicted membrane protein  ali follow..  15  403...YIINEMNRKGLIYEHIGCGATLIFILLSVIFAFGGLLQTALTNNTLFMFGIPLGVVLFFSAGTAKYPSKKLAETISKWQAFKNFLSDYS--QLEEAKITSIHLWEQYFVYAIALGVSDKVVKAYRKAL..... 528
9 -5.950[S] KOG4502 Predicted membrane protein  ali follow..  13  519......SSTTADVTTTNKPKTVKRSSLVYQILLSLQKTLSIVYFLVIFILYFEFFVIIPFIPI-----------------------EYLRINWGSRGNLLESIIIILVYLEFFQNYVLFIEEIFTYVMGFFVILET 653
10 -5.760[G] KOG0449 Succinate dehydrogenase, cytochrome b subunit  ali follow..  24  151...............................................................................FAFHFGNGIRHLIWDTNRGVIKTGSIVLAGTLVLGTYLLAQ................ 196
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.