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Query: [G] COG0738 Fucose permease, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATSIPTNNPLHTETSSQKNYGFALTSLTLLFFMSGFITCLNDILIPHLKNVFQLNYTQSMLIQFCFFGAYFIVSLPAGQLVKRISYKCGIVVGLIVAAIGCALFIPAASYRVYALFLGALFVLASGVTILQVAANPYVTILGKPETAASRLTLTQAFNSLGTTVAPVFGAVLILSAATDATVNAEADAVRFPYLLLALAFTVLAIIFAILKPPDVQEDEPALSDKKEGSAWQYRHLVLGAIGIFVYVGAEVSVGSFLVNFLSDPTVAGLSETDAAHHVAYFWGGAMVGRFIGSAAMRYIDDGKALAFNAFVAIILLFITVATTGHIAMWSVLAIGLFNSIMFPTIFSLALHGLGSHTSQGSGILCLAIVGGAIVPLIQGALADAIGIHLAFLMPIICYAYIAFYGLIGSKSLast
1 -115.000[G] COG0738 Fucose permease  ali  100  1MATSIPTNNPLHTETSSQKNYGFALTSLTLLFFMSGFITCLNDILIPHLKNVFQLNYTQSMLIQFCFFGAYFIVSLPAGQLVKRISYKCGIVVGLIVAAIGCALFIPAASYRVYALFLGALFVLASGVTILQVAANPYVTILGKPETAASRLTLTQAFNSLGTTVAPVFGAVLILSAATDATVNAEADAVRFPYLLLALAFTVLAIIFAILKPPDVQEDEPALSDKKEGSAWQYRHLVLGAIGIFVYVGAEVSVGSFLVNFLSDPTVAGLSETDAAHHVAYFWGGAMVGRFIGSAAMRYIDDGKALAFNAFVAIILLFITVATTGHIAMWSVLAIGLFNSIMFPTIFSLALHGLGSHTSQGSGILCLAIVGGAIVPLIQGALADAIGIHLAFLMPIICYAYIAFYGLIGSKS 412
2 -38.500[G] KOG4686 Predicted sugar transporter  ali follow..  15  32.DNELSLPSGGCCMPSSTSHRFMALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWPNVVLCFVGGFLIDRLFIRLGTIIYMMILLVGQLIFACGGILDAFWMMILGRFIFGIGAESLAVAQNSYAVLWFKGKELNMVFGLQLSVARFGSTVNFWVMQPIYEYVSNFYKGHTALGVVLLLATLTCVMSMTCALILGWMDKRAERILQRNNNPAGTDVFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFVDRF--GLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTIGAHALLTFTQLTPYVGMIIMGLSYSMLAASLWPLVALIIPEYQTAYGFCQSIQNLGLAVITIVAGIIVDHSGGEHMWLQLFFMGWLTIAL....... 441
3 -35.400[U] KOG3764 Vesicular amine transporter  ali follow..  13  73.DSFQSIFSYYDNSTMVTGNATRDLTLHQTATQHMVTNASAVPSDCPSEDKDLLNENVQVGLLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFVSTIMF---AFSSSYAFLLIARSLQGIGSSCSSVAGMGMLAVYTDDEERGNVMGIALGGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVL------------QPSRVQPESQKGTPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMET---CSRKWQLGVAFLPASISYLIGTNIFGILAHKMGRWLCALLGMIIVGVSILCIPFAKNIYGLIAPFGVGFAIGMVDSSMMPIMGYLVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSP 473
4 -34.800[P] COG2807 Cyanate permease  ali follow..  13  2..........TCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAI----RSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKR---PHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALLMLMCFPLLALFLWL----------PQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILISH---GYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGAACGPPLMGKIHDANG-SVPLMGVAILSLLMAIFGLCAGRD 389
5 -34.000[G] COG2271 Sugar phosphate permease  ali follow..  10  8.APHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWTSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM--YKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVK--HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTFGYLGGSVASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 437
6 -33.100[R] KOG2563 Permease of the major facilitator superfamily  ali follow..  10  26.QDETDEEAADQIQLRVYKQRWIVLLAVALLNNTNTMSWIGYAPSGNYVNSFYGES--SAAWLSMVYMMCTIPVGMFAMWAGREWGLRTAVLIAGWANGIGAVIRVISSLDLRFPICMTGQGIAAIAYPFIMFLPTKVAGSWFPDTQRAIATSIGVMSNPLGVLMANLISPAIVKSPEHVIWLNIFTCVPSLIAMLIATFGV--NRSEPKIPPTFSASKPQMDFVSGMKSCFSSKQYIILLIVMGGGIGMFNCLYTVMLELLCPS---GYSNFFSGVCAALMIVGGVFGAAASSIFVDRTKLYEETLKIALGAAVIFGLIFLQYSVILGVTCLLFGVLGLATYPIGLELASECT-SEATSTGLIVLSGQIQSVIYVFIMKNFARPLQ......................... 417
7 -32.300[P] COG2223 Nitrate/nitrite transporter  ali follow..  11  19.....RPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPLFGGRRWTAFSTGILIVPCVWFAVQDTSTPFSTFIIISLLCGFAGANFASSM-ANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAAFGSHGVEQPDGSQLYLANAAWIWVPFLLAAWFGMNELATSKASLKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQ----FPDVQILHYAFFGPFIGALARSAGGAISDRLGGTRVTLINFVLMAIFSGLLFLTSFIAFYGVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIVITWAVYGRHS 461
8 -31.900[G] COG2814 Arabinose efflux permease  ali follow..  12  5VTTVPQDDSETPNEAPAQVASWSGVFAMSVCAFALIASEFLPVSLLTPMARDLQVTEGMTGQGIAISGAFAVLTSLFISALAGSLNRKTLLLGLTLAMGVSGAI---VALAPNYAIYMLGRALIGVVVGGFWSMSAATAIRMVPKRDVPRALAIVNGGNALATVVAAPMGA-YLSTVIGWRGAFLCLVPVSLIALAWQWKTL--------PSMPAAARAPGIGQVFKVFTLFKHPGVVVGMLASSLLFMGQFGLFTYVRPFLETV--TNVHGATISLFLLVLGAAGFIGTVLIGRVLQRSFYQTMIVIPVLMALTALALIAFGSSVIVLVLLALWGLTGTSAPVGWWAWIAKVFPKDAEAGGGLFVAVVMSIALGSTVGGILFDHSGYRTTFVASAVLLAICAVLTVVTARQ 404
9 -27.400[R] KOG2325 Predicted transporter/transmembrane protein  ali follow..  13.GILLEKEQLMNKDKDDRLTNWRLIITAAVVSCLNAVENSVL-GEWPYMREI-NATAQFFGLATSASKCGHAVFALIFSIWSYKTSVKIPLIASRLIAIAACMIYLTIEYVKT--VLMAVYTLLGIANSGG-TVLRGYVTLCSSNEDRPRAFAALGLSFIFSIIVGPTIQLIFSIIPGIWFHLYSAPIWISFILTILTVFVILILIEDISREKKTKLRPSESQSSFSMERWRSLYEFFVRMAVSFSHSTLSTIGSILYMVMFGWDGATTVRVGSITMVIFGVMSSTILLLYIFCHFGKILPQHKVFLFFTIAFGAVYIITYPFEFTSNSVTILVAGMSIPIMSTALDTVYSRILGNIDQAHGAMAVIDDILYMITPIFTTTMFTLYGIGPLWIVKSMAFGIIALTVLVSGQ. 484
10 -24.400[R] KOG0253 Synaptic vesicle transporter SV2 (major facilitator superfamily)  ali follow..  15  43........................................LLSFVGPAVQSLWNLSARQESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVAGFL---SAFSPNYMWLIILRCLVGLGLGGGPVLASWYLEFIPAPSRGTWMV-VFSAFWTVGTIFEASLA-WLVMPRLGWRWLLAFSSVPSSLLLLFYRWTLLKAGESGEAVAVSKIVLKADKEPGFSLLALLSPTLMKRTLLLFAYYGVVLLTTELNNSHRCYPTEKQLRNSNDVNYRDVFIASFA-GLLISAAMVDRLGRKASMASMLFTCCIFLLPLLSHQSPFITTVLLFGGICISAAFTVVYIYAPEIYPTAVRTTGVGVSVGRIGGILCPLVAVGLVHGCHQTIAVLLFEVVILVSGICVCLFP.. 477
11 -24.300[P] KOG0252 Inorganic phosphate transporter  ali follow..  10  1MAKKGKEVLNALDAAKTQMYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVLCSLGSGLSFGHSAMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSSTVPQADYVWRIVLMFGAIPALLTYYWRMKMPETARYTALVARNTKQAASDMSKLHLLGTTTTWFLLDIAYYSSNLFQKDIYTAIGWAETMNAIHEVFTVSKAQTLIALCGTVPGYWFTVAFIDILGRFFIQLMMTIFMFALAIPYDHWRHRENRIGFLIMYSLTMFFAATTFVVPAEIFPARLRSTCHGISAASAGAIVGAFGFLYAAQSIGVRNSLLMLACVNFLGIVFTLLVPES 507
12 -23.900[S] KOG3097 Predicted membrane protein  ali follow..  10  23.PDTASLREKVVLNPGEKWRILKNISIISIAFMVQFTAFQGTANLQSSINAKDGLGTVSLSAIYAALVVSCIFLP---TLIIRKLTVKWTLVCS----MLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLTQVGVDAIIVRFFGFFFLAWQSAELWGNLISSLVLSSGAHGGGSIYLSCIVAAVCIIAFFLDPLKRYGEKRKGSNSAAELSGLQLLSATFRQMKKPNLQL-LIPITVFIGMEQAF--IGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFGSVMKYIGRTPIIVLGAVVHFTLITVELF-NPIIFYAMSGLWGVGDAVWQTQINGLYGLLFRRNKEAASNYRLWESAGFVIAYAYATTLCTQMKLYILLAVLTLGCIGYVIVEILYRKK 481
13 -23.900[R] KOG2816 Predicted transporter ADD1 (major facilitator superfamily)  ali follow..  11  8.......................ELRHLLVTVFLSGLAEYLIRPVMTDVDDSCSLAVYLTGVQQVTVGMGTMVMMPVIGNLSDRYGIKAMLTLPMCLSVLPPAIL---GYRRDTNFFYAFYVIKTLF----------DMAKNVHGTKRISMFGILAGVSSISGVCASLSARFL----SIASTFQVAAISLFIGLVYMRVFLKERLQDADDDDEADSGGCRSHQEVHNGGDLKMLTEPILRDAPTKTHVFNSKYSSWKDMYFLKAR---GFNKNDFAELFLLVTIIGSISQFILPTLSSTIGERKVLSTGLLMEFFNATCLSVAWSPWVPYAMTMLVPGAMFVMPSVCGIASRQVGSSEKVQGCISGVRAFAQVVAPFVYSPLTALF--GFSILCIAISLMIGFLQSLLIKDH 397
14 -22.900[G] KOG0569 Permease of the major facilitator superfamily  ali follow..  10  8.....................ILSIALCLSSGFQQGYIASVLNQPYAQIEQFINSSWIEWSLLNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAWCFPAFELLFVGRIIWSLANGVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVGVPFSTDELWPYNFLPNCAVVVVSMVMFSWV----SVESEIRICEQSIGKNKEKKKTARAKDQTSRLIRYCAWVGVMVKIAYVFTGARSLRGYSTFTLSHFTYSQATWLSFATGLLRLPFTLVPVFLVDRLGRRPLIIVSMLVSFVSILVMIIALKYATFIGLTVLLLVNTCGISVSRFYAAELVPRNLLLSSVSTLTMFLTKIGVEFAFYPTANVIGAQSLLLFLIPTGVFTVMCYLMCPET 470
15 -20.800[P] KOG3574 Acetyl-CoA transporter  ali follow..  10  52.LLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSK-NVSYTDQAFFSFVFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVTPDVIALTVAFFLFEFLAATQDIAVDGWALTM-----SRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEE---GVPKEHLALLAVPM-LQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLV--IVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCR............ 488
16 -19.800[G] KOG2532 Permease of the major facilitator superfamily  ali follow..  6.........................LTLNFTVICMDDIVEDFHMFHNSTETHWFERSTEKSLLFSGVAIGGLIGLVPSVPQISSIGLRNTQTISGFISGLGSFLF-PLAVSVGFYTSFLCRVLQGIGAAVLFTAVGVVPGVWAPKSEANTFMSILACAFQLSNVICMPVSGLLCESAVGWRSIYYISGAITFVLYTVFWFTYT-NVSQKELRKISTGKVEKIKEPVPYFAVSTDPTVIISWISLFGGNMGFYVLCIYGPTYLREV---KFDVKETGFLTALPFILSAIAKFSAGRILTGLSERARFVFFASIFQIGLVAGLVVMAFTTNRVIAQIAFNFAIVSSGLNIMGVVKFADLPKNLIFVNLAGSFREILYKIETLKVRCLQHVHYTLTVMSFTAYASQFLS...... 397
17 -19.300[S] KOG3098 Uncharacterized conserved protein  ali follow..  56.ESASTIYLILYSAFMIILFNFSKFPKFYAVTNVILGQKMPKSFVLESVIHSIHIGKYAGYYGQAVMYIIYMIGCLFSPSILNEIGAKYILICS----AICFASFPLGFFFVNSYYYYFSQMLLGFGYALYYQGHGGYLTSHSTRKTIESNINIAWCVGCICLLLSSGILATVTHMTLDSREKLLFGVFLGASVLGIVNFISCPGKDVTNCIQETKKKGTFMEGFKQTCSALTSKSMLQ-LFPLFTVLGTSSS---FWLSIFTTAMNFTAANSNLTYLAAIYPLSVGVGEIGTALFITQMSRRFTMLIGAIFSILGFGLVHVSSYLVISVIGVIVGIGDCCLNSCRSVICALAMPDRRAQASISKLYQALGSCVLFFASPIIPLYVYTIGVSIHLIIANVFFNITARRTQTM 514
18 -18.600[R] KOG0254 Predicted transporter (major facilitator superfamily)  ali follow..  10  11FQWQYRRQLLVSLSEMMMSCADLNVLVATLITFCHGIALGWLSPMLPKLLSPFYIDVNEASWLGAVISIGGISGNFSFSYLMNRFGRKVSIYALAVPH-------------TSIEWLYVARVFAGLTGGGMFVVLPIFIGEIADNSIRGRLCSFFTLTMNTGIMVGFVVSSHI-------AYHVIPCAVVGLPVLYVLLATRYQKHFDEMRLAIQQQNNDTDDNGLSMSDFLTKRSLKALATGLVLMVANIFTGTFAFNNYMSNIFDAVHTQLDPNTNTIIIGAVQILGTLASIYLVDRYGRKILLIVSCAGSGIGTSAFSAFSAWLPVTLMAFIIFIANVVISVTMVVLVEILPQKIRAVATSFCLGCL-AFASLKTFPLMMFHLGLAATMWFCAAVSVICLFYVVV.... 460
19 -16.400[R] KOG3880 Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human)  ali follow..  9............................YCYFWLFGLINNVLYVVILSAAVDIVGPTLPKSLVLLADIFPSLAIKLCSPFFIDRIKYSYRIWSLITMSCLGMFLVSFK----NLFVCLLGISFASISSGFGEVTFLQLTHYYKQISLNGWSSG-----TGGAGIIGGASYMFLTSIFKVPVKLTLLVFSLLPFAFLFYFKLESNDTNLTYQSLQQIDEAEDDQLVPFPVAFTHTRLVFPYMVPLTTVYLFEYLINQAVAPTLLFPINGDERSKSMPFFFVTYGTLYQLGVFISRSFGHLMRMRSLYILAFLQGVNLCITVVTHSPWAVMILIFYEGFLGGASYVNTFLNILEQEDPDETEFAMGAVIADSFGVFLAALLGLGLE............................ 390
20 -16.200[R] COG2270 Permeases of the major facilitator superfamily  ali follow..  10  1MTVPSQNAETVVAKRG------------IWGWVMFDWAAQPFFTVVTTFARLTDDPISAQATWSNMATVSSIIIALFSGSIADQSGARKPWIAFFAVIIVSLFFLWFAAPGSPIILPIICMILASIAAEFSIVFNDSMMPRLTNPQNVGRISNLAWGLGYLGGMVVLIAVVTLLASATGEDARITGPLAALWYLVFILPMFLLTSDAEKGLPFAAAIRSGLGELKITLRELRYRPVLLRFLIARMLYQDGVNGVIILGGAFAAGMFGWATMEIGLFGILLNVVA--IAGCFAAGRLDQKLGSRITILISLALLLLATVGIVSTEKGSTLLYGVLIGLAFGPVQASSRSYLARNITVAEAGRGIYALSGRATSFMATLSFSIATTISGSAHIGMATLIVFLGAGFLLL..... 449
21 -15.500[H] KOG3810 Micronutrient transporters (folate transporter family)  ali follow..  11  1MDVPGPVSRRAAAAAATVRVRRECWFLPTALLCAYGFFASLRPSLTPYLGPDKNLTEREVF-IYPVWTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYA---QGLLAIQFLEFFYGIATAT-EIAYYSYIYSVVDLGMYQKVTSYCRSATLVGFTVGSVLGQILVSVAGWSLFSLNVISLTCVSVAFAVAWFLPMPQKSLFFHHIPSTCQRVNGIKNDFLMCYSSRPLLCWSVWWALSTCGYFQVVNYTQGLWEKVMPSRYAAIYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEM-TLSLFSLLIAAAVYIMDTVGNIWVCYASYVVFRIIYMLLITIATFQIAANLSMERYALVFGVIALALQTLLTLIVVDASGLGLEFALIAVVFLASGAVSV..... 478
22 -15.400[R] KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)  ali follow..  12  98................PLLKKSLVVFQIMLLTCVTYMGSSIYTPGQEYIQEEFHVGHVVATLNLSLYVLGYGLGPIIFSPLTARYGRLNLYMVTLFFFMI---FQVGCATVHNIGGLIVMRFISGILCSPSLATGGGTVADIISPEMVPLVLGMWSAGAVAAPVLAPLLGAAMVDAKNWRFIFWLLMWLSAATFILLAFFFLRKETGDDRYYTEQDKLDREVDARTFLINTLYRPLKMI-ILAFDLYIA--VAYGCFYLFFEAFPIVFVGIYHFSLVEVGLAYMGFCVGCVLAYGLFGILNPEAFLIVAMCVCWCLPLSLFLVHWILPVISEVFFVLAVFNIFQATFAYLATCYPKYVASVAGNGFCRASFACAFPLFGRAMYDNLATKLVGFLTLGLAIIPFILYKYGPS. 538
23 -15.000[R] KOG3762 Predicted transporter  ali follow..  12  1MENHVGERTVNIFGKVFPRD----AFICRLFYLSFFASFGSLFPLLAVYFKQLGMTAAQAGFLIGSRPIVEFLSGPFWSQFASRFRKQKLLLLFSLGSLVLFTLGI-PAVEQAFMLLLILICLCEFFSAPALPLADA--ATLHSVRDNPAEFGKIRLMASVGWGFAMFIMGIALPAENTTEKNYTLCFVMCVIFMLAAMGLASKFKFDDDVPAPGEGGGGSENSLLLAMKALASMHILLFFVSVVVMGGGAGLVFSFLYWHLQDI---GGSPVLFGILSVVNHASEIITYFYVFKLINKYGHVRVMYLCLAVNFFRFMALSILDNPWMVLPLILQGACLATVWSCASSYISLVAPPHAKQHAQYALQVGIGKGLGSIIGGSVISIIGTRTTFIYGLICLATCAGSFGL.... 558
24 -14.900[R] KOG2615 Permease of the major facilitator superfamily  ali follow..  13  12.......................ELFTVWIIVLCTALPISSLFPFLYFMIDDFNIAKKEAGFVGCSFMLGRAFTSVAWGLVADRYGRKPVILIGTASVVVFNTLF---GLSLNFWMAIITRFCLGSFNGLL-GPIKAYAMEIFRDEYQGLALSAVSTAWGIGLIIGPAIGGFLAQPAKQYPSLFFLPCLAISVFAFLVTIVSSRIPETLHNHLSDDPESNKVAERNGKSSLLNNWPLISSIIVYCVFSLHDMAYTEIFSLWANSPRGLGYSTADVGSVLAFSFGLLIFQLSLYSYAERLLGPIIVTRISGSLAMVVLSCYPLIAKLVTVTSASVAKSVLGTSAITGLFILQNKAVRQDQRGGIAMTAMSLFKAIGPAAAGII.............................. 409
25 -14.800[Q] KOG3626 Organic anion transporter  ali follow..  14  2..................ERIYIFLGLFSFVFFLEAIGGSYINSAVQNIERQFQMSSRTSGFMISASDFGYIPCVVFIAHFGSKGNRARWIGAGAILVSITYLMLASTSNSYPFLVFFFSLLLLGIGRTVPWSLGVPLLDDNIKKKSLPAYFGAISSIRVLGPICGYMIGSFCNK-GAWWMGFLFIGSIALFPSTMLFFFPQGKEGDGSAVQLRDVHKEKLKKSVDSCKKVLSTKIYMGSVLGRVCDVLAFKGYIVFLPKYLENH---GIPQYLVHRYMAMF--GFGLGVATGGYVTKKLKLNRRAAMFVMLMSTLNVCLYSGKIFIGFLTVLPGSFVAGLGVVPAMLILLRSVPPETRSLSLGLAVSLFGTLPSPILWGLVIDAA.......................... 664
26 -14.600[G] COG2211 Na+/melibiose symporter and related transporters  ali follow..  9................................LSYGFGAFGKDFLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNRWGFKPWILIGTLTNSLVLFLLFSAEGTAQVVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPFPRFFALAGFVTAGITLPFVSGADRGFGFQMFTLVLIAFFIASTIVTLRNVHEVYSSDNGVTAGRPHLTLKTIVGLIYKNDQLSCLLGMALAYSNIINGFAIYYFTYVIG------DADLFPYYLSYAGAANLLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAMNAALIVAAGIFLNIGTALFWVLQVIMVADTVDCESIAYSVQTMVVKGGSAFAAFFIALVLGLIGYT-VLFFMMTLVLYFRYYRL..... 435
27 -13.900[F] KOG1479 Nucleoside transporter  ali follow..  10  64..........................FTYLVFYLLGI-----GTMTPYWKYKFRLQKSFTCDLALTATISGTTFLLLNAIFGHHVSLRTKMLGTLWMILILFGVTTGFVEINTFLITLIIVVLLNISAATMSGALYGVAGLFPSEFITAVVSG--QALGGILTALAFILVLAFDTGPNTTAFIFFIVGGVLILLCIVCYVILARKPFFRYYLEGGDKYKVIRAVPSHNRNGSAEGLPLEPILRQVMSKIYLHAISLALLYTTTLSVYPAVTVLMQSEVMFALSNGYFTNILLIMAPKRVKQHEKELASSIMAAALSCGMAVGSLLSLVFVQML............................................................................... 404
28 -13.800[G] KOG0637 Sucrose transporter and related proteins  ali follow..  11  11.NNATALETQSSPEDLGQPSPLRKIISVASIAAGVQFGWALQLSLLTPYIQLLGIPHKWSSYMWLC-ISGMIVQPIVSDRCESRFGRRR-IAAGVALVAVSVFLIGFAADM-AIIIFLTGFWFLDVANNTLQGPCRAFLADLAAGDAKKTRVACFSFFMAVGNVLGYAAGKMFPFTMTKACDIYCANLKTCFFLSITLLLIVTFSSLWYVKDKQWSPPQGDKEEKTSSLFFFGEPMVMLLIVTVINWIA--FPFILYDTDWMGREVYGGNSDGDGALGLMFNSILLGFVSLGVESIGRKMGGAKRLWGCVNFIAGPLAGPSSGIKAGVFSLFTVLGIPLAITYSIPFALASIFSTNSGAGQGLSLIAICIPQMIVSFSSGPLDAQFGGGNLPSFVVGAIAAAV......... 486
29 -13.500[G] KOG2533 Permease of the major facilitator superfamily  ali follow..  10  62.KEQEFTSSELRRLQKLRLKMDLRIIPCLWILYFLSCCLTVSLSFTMNTAQGHSLSAHYLALGLALFYVGYIIFEVPSNLMMAFIEPR--IWVSRIQLTIGVVGACHATKHGNAQSYVALRFFLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGFQARGLYGYQWMFLIWGVVAIAQALSIPWWL-ADKSLHSRYIAEMNVGKRWQWSDLLKSCLDLRVWPFILMYFGIVGVGNGIFNYCTLIIEEI-NPSFSGIDISLLNAPIWLADALGIVTVMPLYDRFHKK-FTGSCLIIIAGLAVANYAPRAWSRYGGLLMIGFGLGPTVPICMAWCSASMAGVASSLALVTGLGNLGSVVTTYALYSGWPRKSNDVCIALIGVSIIACGIEFLLDKTG 532
30 -13.300[GEPR] COG0477 Permeases of the major facilitator superfamily  ali follow..  12  27...............................YYIYAAAAVLV-------TQFFHSDDPLSNDLLSTLALAFFIGSALFGHFGDKIGRKKTLVASLVLMGGSTVVIGLLPNYAQIGLLCVCRVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLLGHNALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVSVVFTKKPMVIGTFIMVATYSLFYIMTAFAQAYSRTALGLGIPANTFTGLLLISAIVFGIFISISGFYADKIGRRKWLIWVTIAIGVLGLAMPLFTPVSVFAFLVIGMAIMGMTFGPMAALLPELFPTEVRYSGASLLASIIGATIAAMISLKINASFGVMGVGIYLAINALMTFLALLASKET 430
31 -13.000[E] COG3104 Dipeptide/tripeptide permease  ali follow..  11  12IALHNDTGMLMSNLNIFKQPNAFYLIFSIEFWERFGF--GMQAILTVYMVKIMGMDESASFVLFGAFSALVYGFVAIGGWIGDKIGTKRAITLGAIVMMVGYVLLGLSTADHP-TLIYIAMGFITVGNGLFKANPSSLLAKIENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVSAVGLAITVVNFLFLAHGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAINNVEHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKKFAFGMALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIVSGLGLAMVAQLVPQRMMGMGMWFLTSASAAVIAGWVASLTSTPANGEVFAQIGYVTAGIAIVTFMIAPK. 497
32 -11.900[C] COG3202 ATP/ADP translocase  ali follow..  10  1MSTSKSENYLSELRKI-EQYENKKFLPLAFMMFCILLN-----STLRSIKDGFVVTDIGTESISFLKTYIVLPSAVIAVKLCDILKQENVFYVITSFFLGYFALFAFIKIVGKWSFASFYTIAELWGTMMLSLLFWQFANQITKIAEAKRFYSMFGLLANLALPVTSVVIGYFLHEKTQIVAEHLKFVPLFVIMITSSFLIILTPRLYDPALVKEKKTKAKLSFIESLKMIFTSKYVGYIALLIIAYGVSVNLVEGVWKSKVKELYPTKEAYTIGQFQFYQGWVAIAFMLIGSNILRKVSWLTAAMITPLMMFITGAAFFSFIFFDSVIAMNLTGILASSPLTLAVMIGMIQNLDKDLRVKGQAAVLGKSGGAIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIF.... 480
33 -10.300[G] KOG4830 Predicted sugar transporter  ali follow..  2............TGGSEEDPFTKPIGRWSVFFYGVGITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQVADAFATIFTGELVDEFGHFKIWHAAGSL------------------LVAISFSSVFGGCLPCSILHNDSLTLETFSYSMFAAINIGWAATQVANLGLYAIALVVFIKAGSKEDTETQYRWIAYSSITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYYQVAMVYLLTRLVLNVSQAYLAFFVIDD---QMDQSAKALVPAIIYICSFVVSVLLQEIPWNGKRLKAYYTAGGIIWIFCGAAILLLPRDISSFMVFIGIANALMMVTAISMQSVLVGAEVGGCAFVCGSLSMSCGLALYVLQSHQTTSPTRYGLGLVPALCSFVGVAVTFFME. 421
34 -9.660[P] KOG4505 Na+/H+ antiporter  ali follow..  10  6......................VEISKPHLAYAIIGGFTSLFMLCSLIIKEKLFLGEATMATA-----TGLIFGPYVAKLFPTSWGNTDYITEELARVLLVVEVFAAGAELPRAYMLMFVMLLPVMIFGWLVSTGFMYALIPR--------LSFLESL--IAACITPVLASSIV-----------------------------------------GKGKFARRVPGHLRNMLLAESGC-GMAIPFLYLAIYLIIEKPARHAGRDWVCIIILYECTFGCVLGAIIGVIARKMIKFSERRGLMDRESFLVFYFVLALFCGGIGTIIGVDDLLVSFCAGAAFSWDSWFSKKTEESHVSNVIDLLLNLSFFVYVGAIMPWPQFHMPHMDLSVWRLVVLAICILIARRI........ 342

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.