FFAS03 results for COG0864

Query: [K] COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 .`
#	Score	Template	Links and tools	%id	First	`MEEGITRIGVSLPKNLLDEFDRIISTRGYSSRSEAIRDAIRTYITEYRWLESEKGEIVGVLVVLYDHHVKGVSDLLIDLQHDFHEIITSSTHIHLNEDQCLEMILVKGKMERIKVLVDKISAARGVMNVKLISAVKKV`	Last
1	-75.300	`[K] COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain`	`ali`	100	1	`MEEGITRIGVSLPKNLLDEFDRIISTRGYSSRSEAIRDAIRTYITEYRWLESEKGEIVGVLVVLYDHHVKGVSDLLIDLQHDFHEIITSSTHIHLNEDQCLEMILVKGKMERIKVLVDKISAARGVMNVKLISAVKKV`	138
2	-13.600	`[K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain`	`ali follow..`	23	26	`.....RTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQA..........................................................................................`	68
3	-13.400	`[K] COG3905 Predicted transcriptional regulator`	`ali follow..`	22	40	`..AIMTAFTVRLPDEVAEKLDQLAEKLD-RSRSYMAVQAIEDFVAREE..........................................................................................`	84
4	-12.500	`[R] COG4710 Predicted DNA-binding protein with an HTH domain`	`ali follow..`	15	22	`...FDMATSIRLSPEMEQRLNYLASHTG-RTKAYYLREIIEHGIEEME..........................................................................................`	65
5	-8.230	`[S] COG4877 Uncharacterized protein conserved in bacteria`	`ali follow..`	11	2	`...ARKQVPLRLDPAVYDAIAKWAADEA-RSTNAQIEMMLREQLRKAG..........................................................................................`	45
6	-8.150	`[S] COG3514 Uncharacterized protein conserved in bacteria`	`ali follow..`	21	67	`ADQTKVFTAIRLDADLLEAFKA--TGKGWQTR---VNAALRQFIAEHPLNQ.......................................................................................`	112
7	-7.830	`[S] COG4423 Uncharacterized protein conserved in bacteria`	`ali follow..`	17	1	`.......MALNIKDPEVDRLAAELADRLHTSKTAAIRHALSAQLAFLE..........................................................................................`	41
8	-6.860	`[S] COG5304 Uncharacterized protein conserved in bacteria`	`ali follow..`	18	92	`.APKDKSITLRLSSELLTAVKNTASAQGMNYQK-YIREVLEQSVLR............................................................................................`	135
9	-6.610	`[R] COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid`	`ali follow..`	7	4	`.KRTTQSVTVTVDRELVNRARDA-------NMSATLTVALNAELKKHAATRWREENAEAI..............................................................................`	57
10	-6.460	`[S] COG3132 Uncharacterized protein conserved in bacteria`	`ali follow..`	13	1	`MKYQLTALEARVIGCLLEK--QVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGTPGELRSRAARMYEFSDMAEVELTL.....`	137

FFAS is supported by the NIH grant R01-GM087218-01

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