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Query: [C] COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G), from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLMATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQCRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQLast
1 -222.000[C] COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)  ali  100  1MLMATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQCRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ 910
2 -169.000[R] COG3383 Uncharacterized anaerobic dehydrogenase  ali follow..  16  3.AKVSVRINGEARDVVEGTRILDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVD-------GELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNGNCKVHNTTELLGVEKQDRPYREKGYLNDFTHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIWDDDRPASCVSCGLCATVCPCNALMEKSMLGQAGRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWEDAIHLVATKLRGNDSIGFISSSKTTNEENYLMQKLARQVFETNNIDNCCQAPASDGLTRTVGIGADSGTVEDIESAGLVIIVGASPADGHPVLASRIKRAQKRGQKLIVSDLRKHEMAERSDLFIHPKQGTDFVWLTAVAKYIIDQNWHDQVFMENRISNVADYLAFLEPFTLEYAEKETGLPAETLKLVAEMIHEADGTAVCWGQNIAGSHTSSAIANLLLVTGNFGRGAGAYPLRGHNNVQGACDMGGLKNNEMLDAIEAGTLHSMYVIGEEMAVDSNSNHVQEILSSLDFFVVQDVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEP-----LGDSKPDWWIIQEVARACGRTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLV---------------------------PVSADGKDMPLLYEERFNF------------------------------------------PDGKAQFSTLPYIAPITFPEEFNLTLNNGRLLFHEGNLTDKSKGLDYKLPEVFVEVSHELAKERDIESGSLVRLSSPYGRIKLRAVVTERMKGNEVYVPMHSETAVNLLTSSAGDVRTKTPA 926
3 -154.000[C] KOG2282 NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit  ali follow..  25  30.NLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEI-----EKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFT-ARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSRVAGMLQQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTE-EVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLG-------------------------------------------------DSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKGDWKVMNILHRIASQVAALDLG---YKPGVEAIRKNPPKVLFLLGADG-----GCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTP-----PGLAREDWKIIRALSEIAGM-TLPYDTLDQVRNRLEEVSPNLVRYDDIEGAN....................................................................................................................................................................................................................... 663
4 -72.600[C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing  ali follow..  12  23............................................................................................................................................................................................SAIGSLALASSAFTLPFSRIAHAAADLASGNV-AEKAVWSSCTVCGSRCLLRLHVKDDTVYWVESNDEYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGGKFERISWDEALDTIGDNLKGNEAVHVLGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRMSTYYVEQARERSNARMIVIDPRYNDTAAREDEWLPIRPGTDGALAAAIAWVLITEDLIDKPFLDKYCIGYDETTLPAIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGRHSNGEQTARAIAMLSVLTGNVGNGGNSGVREGTWDIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHNMGYVILGQPATSPK-----FERKPIYWTLSEVAKRLGPDVQTFTEGRTQHEWVKYLHRNPEMPDYEEMKQTGIF--------------KKKCPEEHYVAFRAFREDPAANPLKTPSGKIEIYSERLATLANTWE-------------------LKKDEIIHPLPAYTPGFDGWDDPLRQRYP----LQLTGFHYKARTHSSYGNIDILQQACPQE-IWINPIDAQARGIQHGDTVRVFNQNGEMLIPAKVTPRILPGVTAIGQGAGGSINILTSHRPSPLAKGNP 800
5 -53.600[C] COG5013 Nitrate reductase alpha subunit  ali follow..  10  12............................................................................................................................................................................................KKKQGEFADGHGETSNESRAWEGAYRQRWQHD---KIVRSTHVNCTGSCSWKIYVKNGLITWETQQTDLPNHEPRGCPRGASYSWYIYSANRLKYPKVRKLGGFVRSSWDEVTEIIAAANVGPDRVIGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYDYCDLPPASPQIWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVSITPDYSEVAKLTDLWLNPKQGTDAALGMAFGHVILKEFHLDRPYFVDYCRQYTDMEDADTPYTPAWQERITGVPAARATQVAREFADSGKAMVIIGAAMHMDMNYRAVINMLMMCGCIGSGGGWAHYVGQEKLRPQTGWAPLAFSNLLGSSGKGHMNDDLGKAGGPRPTEVDWVDDGAEGKLDLVTTLDFRMSSTCMYSDIVLPTATWYEKDDLNTSDMHPIHPLSAATDPA-----WEAKSDWEIYKAIAKKFSAVAEGHLGVEQLLHDTPTELAQPFGGDGHDWKKGECEPVPGRNLPTLHLVERDYPNVYRKFTRVVESGVSQGRPRIDSAIDAAEVVLALAPETNGQVAVKAWEALSKITGREHAHLALPKEDEKIRPPVNTRTTEKLLNRKPNGNPEITLNWITPHQKWGIHSTYSDNLLMLTLRGGPIIWLSEHDAAKAGIVDNDWVEVFNANGAATCRAVVSQRVKDGMVMMYHAQERIVN............... 1177
6 -48.800[C] COG1029 Formylmethanofuran dehydrogenase subunit B  ali follow..  15  3...............................................................................................................................................................................................................................VIKDAVCSLCGSLCDITVTVEDNKITKIEN----------ACILGHSKFVGMFEHDRIETPMIRKDGELVPVSYEEAIEAAAKILVNSRRI--LSYGWCSTSCEAVSGAIELAEETGSVIDSTANVCHGPSALAAQEKGSPSASLGEINRADVIVFWGCNPVHAHPRHMSRYTEKGRKGRTMVVIDVRKTDTAKLADNYVEIEQGSDLLLITALRSIV-------------------------NGHEDVVPETVAGVPKAEVLELAETLKNAKFVCIFFGMGVTKYKNGDAVSSLISDLNQHTK-AVMIGMRGHYNVTGFGQVATWETTGANDLLVREEPDAAIIAAADPGAHFP-QKAVRHLAKIP-VIQIDPYANPTTEIADVVIPSAIVGEAEGTAYRMDAISLRMKKLIDT-------RFKTDEEIVKDLTAKVR........................................................................................................................................................................................................................................................ 428
7 -16.100[C] COG1146 Ferredoxin  ali follow..  14  26....................................................................................................................................PWWGVDRKEIEWYPTIDYDKCVTCGICFVTCGR----RVFDFDKKEGKVIVARPYNC---MVACQTCMNLCPTGAIS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 95
8 -15.600[C] COG1142 Fe-S-cluster-containing hydrogenase components 2  ali follow..  12  12...................................C---------GCHTCEA---------------ACSET-------HRQHGLQSMPRLRVMLNEKESAPQLCHHCEDA--CPVNAITRVDG--------------------AVQLNESLCVSCKLCGIACPKAPPAPPAPARISTLLDWVPGIRAIAVKCDLCSFCVRMCPTKALH............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 165
9 -15.200[C] COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB  ali follow..  12  1..MNAIWIA-XLLGLAFGAILGYASRRFAVE-PVVEKIDEILPQSQCGQCG--------------YPGCRPYAE----------------------AISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQELTPARMVAVI--DENNCIGCTKCIQACP----VDAIVGATRAMHTVMSD------LCTGCNLCVDPCPTHCISLQPVAETPD-----SWKWDLNTIPVRIIPVE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 189
10 -14.400[C] COG1153 Formylmethanofuran dehydrogenase subunit D  ali follow..  21  2..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KIRIITYSDIFQDKAMVENRFGEEYRNLSAVIKMDPADLKQLNVKKGDTVVLKNSFGTIVVKAEESETPHRGIAYMPNSP--WSNMLVSDGTGG-TGVPK 100
11 -14.100[C] COG0633 Ferredoxin  ali follow..  18  27.NMPKIIVEGAVLEAQTGETILDVALKNGIAIEHAC-----EKSCACTTCHCIVREGFDS-EPESRLSCQARVAEDLVVEIPKYTLNHASED.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 138
12 -14.000[C] COG0437 Fe-S-cluster-containing hydrogenase components 1  ali follow..  11  1.......................MTTQYGFFIDS-C---------GCKTCEL---------------ACKD--FKDLGPEVSFRRIYEYAGGDWNVFAYYLSISCNHCDDPA-CPSGAMH-------------------KREDGFVVVDEDVCIGCRYCHMACP--------------GAPQYNAEKGHMTKCDGCYSCVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPNIVIKPNANS....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 189
13 -13.600[C] COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit  ali follow..  12  2..........................................................................................NTLFGKAKEEARVISPKSVD--EYPEAPITLGTTLVNFTGDWRTFMP---------VIDESKCVKCYICWKFCPE----PAIYIKEDGFVAI------DYDYCKGCGICANECPTKAIT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 99
14 -13.300[C] KOG3256 NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit  ali follow..  13  4.................................................TMRIFTASRNGQRLFGSHGARLLAAQRAEPKDIVEEFADITDRAASTMFFGELL------RGFAVTLAHIFK--EPATINYPFEKGPLSPRFRGEHAPSGEERCIACKLCEAICP----AQAITIEAEERADGSRRTTRYDIDCIYCGFCQEACPVDAIV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 173
15 -13.100[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs  ali follow..  19  60IMPLTLKVNGKQLEVDTRTTLLDALREIGTKK---CDH------GQCGACTVLVN-------GRRLNACLTLAHQGAEITTSPDNLHPMQAAFIK----HDGFQCGYCTSG----LKEIQDGIPSHVTVDLVSPPERTADEIRERMSGNICRCGAYANILAAIEDAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 225
16 -13.100[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit  ali follow..  11  25KNVREYRI--DTYYIDCGPMVLDALLYIKNNIDPTLTLRRSCREGICGSCAMNID-------GTNTLACTKGMEEIKGTVKVYPL---PHMPVVKDLVPDLSN------------YAQHRSIEPWLKTVSPTPAKEWKQSHEDRLKLDGLYECILCACCSTSCDRYLGPAVLLQAYRGERLDNLEDPFRLYRCHTIMNCAQACPKGL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 241
17 -13.000[S] KOG4367 Predicted Zn-finger protein  ali follow..  10  1............MEEMEEELKCPVCGSF-YREPIICSHN-------CQACARNILVQTPESESPQSHRAAGSGVMSLYSEADSGYGSYGGSPALAPVPRNSCITCPQCDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEYCDPCRLRCHPPRGPLA--------KHRLVPPAQGRVSRRLSPRKVSTCTD----------------ELENHSMYCVQCKM-CLEEGKHSSHEVKALGAMWK-------------------LHKSQLSQALNGLSDRAKEA--KEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDAL-RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGMEYCLEVIKENDPSGQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 433
18 -12.800[C] KOG3049 Succinate dehydrogenase, Fe-S protein subunit  ali follow..  10  38.RIKKFAIQTYEVDLKCGPMVLDALIKIKNEVSTLTFRRSCR-EGICGSCAMNIN-------GGNTLACTRRIDTNLNKVSKIYPLPHMY--VIKDLVP---------DLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCDKYLGPAVLMQAYREERLAKLQDPFSLYRCHTIMNCTRTCPKGL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 257
19 -12.600[C] COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)  ali follow..  19  12.....................................................................TFTQLRSLVMI--------FGHAFRKRDTLQYPEE----------------------PPRYRGRIVLTRDPD-------GEERCVACNLCAVACP----VGCISLQKAETEDGRWYPEFFRINCIFCGLCEEACPTTAIQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 117
20 -12.100[C] COG1145 Ferredoxin  ali follow..  13  155....TISEKSEILPYEDAVKLVKERDYIAV-----C---------PCR----VMARLVGEGCRHSIENCIH-VEHGLGRRISADEAIEILRQSNREGLVHLTERCCSDCCVFFKAVHEAKHPNTIAHSSY--------------LATVDTSRCIACGICMLRCP-----KAIKAKINREPASVDAE-----KCLGCGVCVPTCPMEAIE............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 336
21 -11.900[C] COG1141 Ferredoxin  ali follow..  14  47.................................................................................................................................................VYVDEITCIGCKHCAHVARNT-----FYIEPDYGRSRVIRQDGD--AEEVIQEAIDTCPVDCIH............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 103
22 -11.700[C] COG1140 Nitrate reductase beta subunit  ali follow..  10  1.....................MKIRSQVGMVLNDKC-------IG-CHTCSV---------------TCKNTSREGVEVETKPGQGFPTDWENQEKYKGGWIRKINQPRMGNRAMLLGKIFANPHLPG--YQNLHTAPEGSKSQPIARPRSLITGERMAKIEKEDDLGGEFDKLAKDKNFDNIQKAMYSQFECEHCLNCVATCPSGAIYKREEDGIVLIDQDK------WRMCITGCPYKK--------IYFNWKSGKSEKCIFCY------------PRIEAGQIRYLGVLLYDA--DAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAME----KLALPLHPEYRTLPMVWYV-------SPIQSAADAGELGSNGILPDVESLRIPVQYLANL---LTAGDTKPVLRALKRMLAMRHYKRAETVDGKVD--------------TRALEEVGLTEAQAQEMYRYLAIAEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGS-----TKFNLFNSRRIDAIDVTSKTE.................................................................................................................................................................................................................................................................................................................................................................. 509
23 -11.600[T] KOG1701 Focal adhesion adaptor protein Paxillin and related LIM proteins  ali follow..  13  422.............NVVGEGTGCTAMDQV--------FHVD-----TCIICNNKLRGQAVEKKAEQCNVCSKPIMERILRATGKA----------------HP-HCFTCV---MCHLDGIPFTVDAGGLIHCIE-----------FHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVH--------YRCEDCGGLLSEGDNQGCYPLDGHILCKTCNS-ARIRVLTAKAS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 609
24 -11.400[C] COG0348 Polyferredoxin  ali follow..  11  69LIMAESLATGFMPTMTALLGALIVVVLYAILGSRFC----VCPLNIVTDASAWLRRKLEIRQSALVMILLGSALSGLLLWEWLNPVAALGRALFDLFIVEHGW-C-LCPIGAAYGVIGAKGLFRIKVEH--------------------RQQCDNCMDCYNVCPEPQVLRDPLHAKKSESPLVLSK-----DCISCGRCIDVCPEKVFI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 277
25 -11.300[R] COG5141 PHD zinc finger-containing protein  ali follow..  11  204.............ECENSNAIV--CDNCNTSVHQNCYGIPFVPEGQCKKCLLAPHEV---------ICCAFPDRDGAFCTTLDPEISFHDTSRLDLVIASIPLVCCICLRWGTC-------------------------------VQCSDKNCITCAR-----------------RAGFFYKIYSHSASYDSVDMETYCDKHTPPDYLNGLMKRLFPLAE-QATKAPDFVPEGPWKSHPLPAFIVDKVTKVLLSYNVKRQDLPSIVTDICKFYHMKRRSRKDAPLLKS----QLLMDSLENLPVRASKDRVRSLEVAKALQDQYQSLLTLVESTAK---LLKCQLSNLRKKFLNLNYFPAQRLLQDTLVKIIDLDVDGLF-NMPLDNGWIGWVELKRQVFS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 568
26 -11.100[O] KOG2231 Predicted E3 ubiquitin ligase  ali follow..  12  41.............TGNDDNACVVCFKNVEIFSIGDCDHP------VCYECSTRMRVLCQQNE----PICRHVLSKKYRIGFCTAEIRQQFFKLLDH-------PCPKCDAPPYRTFEGLRNHVRSEHKLL------------------------YCDLCVETLNIFTFERRC----TQAELQLHNTKGDPDNRSHRGHLCEYCNKRYVDRDELFRH------LRREHYFCHFCDADGCNEFYNDYADLAE---------AEHFLCEEGQFVGAFRNEIEYKAHVANVHGKSLNKQQAKQT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 302
27 -10.700[C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF  ali follow..  12  34...ITVEINDKSFTAPAGDKLLNMLSSHGIFVSSAC-----GGGGSCGQCRVTIKESKREAKEGCRLACQVNVKQNLKIELPEESNDNKATFIKELKLKIPDGDVVPFRAGGFIQIEAEPHTVKYADFDVPTEYRGDWDKFNLFRFESVVTEPTV--RAYSMANYPEEHGIILLN---------------VRIATPPPSVPDAPPGIMSSYIWSLK------------------PGDKVVI-------------------------SGPFGEFFAKDTDA---EMVFIGGGAGMAPMRSHIFDQLKRLHSKRKISFWYGAR-SRREMFYEEDFDQLQAENDNLSDPQPEDNWTGYTGFIHNVLLENYLKDHPAPEEFYMCGP------PMMNAAVIKMLKD............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 392
28 -10.700[S] KOG4623 Uncharacterized conserved protein  ali follow..  11  1MLTLLIRLAATAIPVCAILFVIRSRYDARVNC-WFCNGNVRVPYQDCPSC-FTKDGDYNRDITSQRDCSLGSQKNSSKGSSSICANSYYSDVLTAQPPAPKNGLCDQCNEAQRLKVEKLSQFEPKNESRFDQELKVYRER-----LEKQFRLCSSCERHVN............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 175
29 -9.940[C] COG1150 Heterodisulfide reductase, subunit C  ali follow..  12  5....................................................................................................................RDTVIREEDLNPDFLEELSELVEPVFEEEEVLSVQACYQCGTCTGSCTSYRTRLIMRKLQLGLVDEV-IKSDELWMCTTCYTCYERCPRGV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 99
30 -9.860[R] KOG3002 Zn finger protein  ali follow..  10  1........................................MAPGGSALKEALESNSTGVDYEVKMAKV--EANSKPTKSGSGSIGKFHSSNGVYELL------ECPVCTN-------------------------------YPPIH-----QCTLCSSC------------------------------------KLRVQNTCPT---CRYELGNIRCLALEAESLEVPCRYQNLGCQDIFPYY-----SKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLGSDKEELKLRVTGRIWKEE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 305
31 -9.790[S] COG4357 Uncharacterized conserved protein  ali follow..  14  1..MIETAIYGKTVDDQSRVHWHLPKDVIAIRFK--C-----DKYYACFECHQELSSHPLEKYDLLDDANKHLIICGV----------RHEMTFAEYYDYNSNLICPNCRSNPGCKLHYHLY------------------------------QNPPPAMC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 116
32 -9.690[S] COG3862 Uncharacterized protein with conserved CXXC pairs  ali follow..  13  2................................................................................................................................................................................................................................EKEMICIVCPVGCHISVNTETYEV------------KGNSCPRGEYGKEELTAPKRVVTSTVKKNALDKRCPVKTEKSIPKELNFKLDELKNIELIAPVKRGDIVIKNVFNTGV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 106
33 -9.680[F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A  ali follow..  14  6.DSIRFILNDSEIVLAPTSTLLDFLRLTGTKE---CAE------GDCGACTVLVGRLAEDASGESVNACIRFTGNATHVVTVEAAADGTLHPVQQALVDFHGSQCGFCTPG-------VMSLYGLWLADENPSRAAIEKALQG-------NLC----RCTGYEPIVRAAEAAAIVPVDAADLAGVLADHPGATIVAGCTVGLWVTKQMRSLNPVVFINGIAELQRIESSTAGLTIGAGVSYTAAHEALSSAYPSFGRLLDGDQVRNMGTIGGNIANGSPGATVTLRSKDGQRTLPLEDFFIAYGKQDRRPGEFVESLFVPALPADERFAAYKISKRDISALLGAFRISLDGDRVKTARIAFGGMAATPKRAKTVEAALI-GQAWTEETVRTAQAAFET................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 451
34 -9.640[TZ] KOG1044 Actin-binding LIM Zn-finger protein Limatin involved in axon guidance  ali follow..  13.......VEGEVVTALGKT-----------------YHPNC----ACTICKRPFPPGDETTFSSNCAGCGRDIKNGQALLALDKQ---------------HLFKCKSCSKDGACE-KDYQGLFGVKHQFITGKVLEAGDKHYHP-------SCARCSRC----QMFTEGEEMYLQGS---KQSTKTEEKLRPTRTSSESIYSRPGSSIPGSPGHTIYAK----------VDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFYTSGYDDKQERQSLGESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQHFHRPGNEPSSGRNSPLPYRPDSLPLTPTYAQAPKHFHVPDQGINIYRKPPIYKQHRALAAQSKSSEDIIKFSKFPAAQAPDPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRERSSLLASRYDSPINSA--ASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQTLPDGHMPAMRMDRGVSMPNMLEPKIEMLMVTNNKILREVDRTRLERHLAPEVFREIFGMSIQEFDRLP----------RRN----DMKKKAKLF...................................................................................................................................................................................................................................................................................... 626
35 -9.450[S] COG3592 Uncharacterized conserved protein  ali follow..  16  3.............................................................................................................................EETLLEQGYRKYRGADVD--IYFNTNICAHSGNCVKGNAELFNLDRKPWIMPDNV-----------PKEEAKRVIHTCPSGALQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 73
36 -9.340[Y] KOG2439 Nuclear architecture related protein  ali follow..  2.....................................................................................................................................SALLSESDLNDFI----SPALACVKPTQVS-GGKKDNVNMNGEYEVSTEPDQLEKVSIDCLACSGCITSSEEILLSSQSHSVFLKNWGKLSQQQD-------------------VVSVSPQCRLSLAQ-------YYGLTLEAADLCLMNFFQKHFQ----------CKYMVG--------TEMGRIISISKTVEKIIAHKKQKENTGA-------------RKPLLSAVCPGFLIYTEKTKPQLV--LNVKSPQQITGSLIRATFESSFYHLSLMPCFDKKLEASRPESLDDGIDCVITPREIVTMLQELNLDFKSFLTEDTSLYGRLSPPGWDPRVHWASNLGGTCGGYAYQYVTAVQRLEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANSREMAAATAATAIEVNACPGACMNGGGLLNGEQNSLKRKQLVQTLNKRHGEELAMVDPLTLGPKLEEAAARPLSLEYVFAPVKQAVEKDLVS----VGSTW................................................................................................................................................................................................................................................................... 491
37 -9.070[S] COG3196 Uncharacterized protein conserved in bacteria  ali follow..  19  31.........................TSTPQKLPQFRYHPDPVGTGSCVSC-YTYTGPVYAEEELNEAICPWCIADGSAASRFDATFDDVPEDVTEEVLCRTPHHC-AAAFLGPVGASEVADLPDALDALRNEYRGYDWPADKIEEFILTLDRCLSCGV-HLAYADFA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 212
38 -9.040[O] COG0068 Hydrogenase maturation factor  ali follow..  12  1MATEEIRVRGTVQGVGFRPTVYRLAKACGLR-----------VCNDGEGVLIRVCGDEGALTEFVARLQQECPPLAKINELIRTPYQGELNFHDFVISHSVTPDAATCP---EC-QREI---FDPFSRFYRY-----------PFTN-----CTHCGPRLSIIRAIP-------YDRCNTSM---------------SAFVMCPE---CEDSYHDVENRRFHAQ--PVACHTC--GPKAWLERADGKPVTASMFSMLDDKGEIVAIKGIGGFHLA------------------DATQEAAVEKLRQRKRRYDKPFALMARDINVIEKYC----------------------------------------FVNDRERELLVSP----AAPIVLLEKRTEEISSFPI---ASTVAPGQNTLGFMLPYTPLHHLILKRMNRPIVLTSGNIADEPQCVANDEAKEKLSHIADYFLLHNREIVNRVDDSVVRVIDIMRRAR------GYAPAPIKLPPGFDNIPQILAMGSELKNTFCLLREGEAILSQHLGDLENALAFDCYQDNLYLNLFVIAVDLHPEYLSTKLGKELATIQLQFIQHHHAHIAACMAEIAFDGLGYGT-DGKLWGGETQFQRLATFKPVAMIGGKQAIYQPWRNTYSHLLSANIWD..................................................................................................................................................................................................................................................... 582

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.