current user: public
If you have questions about the server, please let us know.

Query: [M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350
# Score Template Links and tools%idFirst MTTLTLAELATITGGELFGDPTALVSAVAPMDKAQLGHVTFLSNPKYSKHLGDCKATVIMVKTSERELCPSNALVVADPYVAFAKVAQALDSTPSPAHGIAPSAVIAEDAKLGHNVSIGANAVIESGVQLGDNVVIGAGCFIGKQARLGDNTKLWANVTIYHKVEIGSDCLIQSGTVIGADGFGYANERGEWIKIPQLGSVRIGDRVEIGACTTIDRGALDDTVIEDNVIIDNQLQIAHNVHIGYGSALAGGTVIAGSTRIGKYCIIGGASVINGHIEIADGVTITGMGMVMRSIEEKGMYSSGIPLQTNKEWRKTAARVHRIDDMHKRLKALEKLLEQSDTVQPDNSQAELast
1 -110.000[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase  ali  100  1MTTLTLAELATITGGELFGDPTALVSAVAPMDKAQLGHVTFLSNPKYSKHLGDCKATVIMVKTSERELCPSNALVVADPYVAFAKVAQALDSTPSPAHGIAPSAVIAEDAKLGHNVSIGANAVIESGVQLGDNVVIGAGCFIGKQARLGDNTKLWANVTIYHKVEIGSDCLIQSGTVIGADGFGYANERGEWIKIPQLGSVRIGDRVEIGACTTIDRGALDDTVIEDNVIIDNQLQIAHNVHIGYGSALAGGTVIAGSTRIGKYCIIGGASVINGHIEIADGVTITGMGMVMRSIEEKGMYSSGIPLQTNKEWRKTAARVHRIDDMHKRLKALEKLLEQSDTVQPDNSQAE 351
2 -47.800[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase  ali follow..  22  2...............................................................................................................IDKSAFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFASIGEVNQDLK-------YAGEPTRVEIGDRNRIRESVTIHRGTVQGTKVGSDNLLMINAHVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVP-PYVIAQGNHATPFGVNIEGLKRRGFSREGLVAIRNAYKLLYRSGKTLDEA.... 232
3 -22.700[R] COG4801 Predicted acyltransferase  ali follow..  17  33.....................................................................................................QYSISGDMVIMGEGVAVSGDVVACSDTRIDMWSKMGSNVEVGKNAYLGEFVSIEGKLTVEGDLDVGKEVKIKGGFVAKGW--------RNPVPVIMFLFLYIREMMRLGRGEEIEKALEKILIIPTGTKITEVIEVGGDAVVGNNCYLIGNL-KAQSVETGNALILKGSIYSEGKINIGENSTIYGNLSSKGQV........................................................ 240
4 -18.900[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)  ali follow..  19  162......KAVKEINTGILVLPNAKLEAWLNSLSSNNAQGEYYLTDLIAKAVADGIKIHPVQVRSSHLAAGVNNKLQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNCIFEGKIELGDNVEIGANCVI-KNAKIGANSKIAPGCEVGENNQIGPYARLRPQAKLADD-------------------VHVGNFVEI-----------KNAAIGKGTKANHLAEVGSKTNFGAGTIIANYDGVH-KTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDGKLALARSRQTIIDGWVR.................................... 450
5 -17.100[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase  ali follow..  18  95...........................................................................................................EARFQKEGFRVVPPAAVRQGAFIARNTVLM-PSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANP-----------TIIEDNCFIGARSEVVEG----------------VIVEEGSVISMGVYIGQST--IYDRETGD........................................................................................ 221
6 -16.100[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily  ali follow..  16  8..............................................................................................................................................GLIPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGD-----------------------GRLILEAGSNLQDGCIMHGYCDTDTIVHENGHIGHGAIL--------------GCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQEARQLLVGSPARVLRQ....................................... 143
7 -15.200[Z] KOG3121 Dynactin, subunit p25  ali follow..  19  11..............................................................................................................................................DEYVETASGNKVSRHTVLCQNIILNGKVIVQSGAIIRGD----------------LANVRTGRYCVIGKNSVIR----PPYKQFSKGIAFFPMHVGEHVFVGEGAVVSAAT-IGSYVYIGKNAIIGRRCVLKDCCVIEDGAVLPPETTV-----SSYMRYTARGTIEGGQGNPYFVPAAMQDEMINYTKSFYEHFVRAPAP........ 187
8 -13.000[J] KOG1461 Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)  ali follow..  19  308....................................................................................................RQGIYKASDATQLPSAHVGASYVIGHATNIGSGTKI-LNSVIGNGCSIGSNVVI-QGSYIWNNVTVEDGCEIRNA--------------------------IVCDEVKVCAGAIVKPGVV----------------LSFKVVVGRDFVVPAYSQVSLLRQPMEE....................................................................................... 427
9 -12.300[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)  ali follow..  18  242.........................................................................................................................................AYRENSPGLWIGQNTYIDPSAHIEAPAVIGNNCRIGARVQIE-------------------AGTVIGDNVTIGADANLKRPIVNGAIIGEEAQLSACV-------ISRGTRVDRRAHVLEASVVGSLSTVGEEAQISPGVRVWPSKKIESGAILNINL........................................................ 374
10 -12.100[E] COG1045 Serine acetyltransferase  ali follow..  23  141.......................................................................................................................................................................................................QVDIHPAAKIGRGIMLDHAT--GIVVGETAVIENDVSILQSVTLGG----TGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVP-PHTTAAGVPAR........................................... 242
11 -11.300[E] KOG4750 Serine O-acetyltransferase  ali follow..  20  180.......................................................................................................................................................................................................AVDIHPGAKIGKGILLDHAT--GVVIGETAVVGDNVSILHGVTLGG----TGKQSGDRHPKIGDGVLIGAGSCILGNITIGEGAKIGSGSVVVKDVP-ARTTAVGNPARLIGGKENPRKHDKIPCLTMDQTSYLTEWSD............. 311
12 -11.300[J] KOG1462 Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1)  ali follow..  17  351......................................................................................................PEQRLVDVTVSERALVGADCMVNEGTTIKDNSNI-KKSIIGKNCVIGKGVVV-SNSILMDNIVVEDGVRLE--------------------------SCIVASGAQIGAKSKLRECEIGDHRVEAGRIARGERLVDME............................................................................................................... 461
13 -11.100[R] COG0110 Acetyltransferase (isoleucine patch superfamily)  ali follow..  21  71...........................................................................................................................................................................................................GYNIFLGNNFFANFDC---------VMLDCPIRIGDNCMLAPGVHIYTAT-LGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVP-DNVVVGGNPARIIKK....................................... 182
14 -9.580[GMO] KOG1460 GDP-mannose pyrophosphorylase  ali follow..  17  261...........................................................................IKSPGMSLRCSGLYLSQFRLTSPQLLASGDGTRSAIVIGDVYIHPSAKVHPTAKIGPNVSISANARVGPGVRL-MSCIILDDVEIMENAVV-TNAIVGWKSSIGRW----SRVQAEGVYNSKLGVTILGDSVAVEDEVVVTSSIVPNKTLNVSVQDEIIL.................................................................................................................... 415
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.