FFAS03 results for COG1585

Query: [OU] COG1585 Membrane protein implicated in regulation of membrane protease activity, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140`
#	Score	Template	Links and tools	%id	First	`MGAIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVALIGVPVWAEFVTFAVASAALLMFIRPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQGTTAIVWKEA`	Last
1	-65.000	`[OU] COG1585 Membrane protein implicated in regulation of membrane protease activity`	`ali`	100	1	`MGAIIWFIGALVLAGLELAVGEFTLLMLGGAALATAGVALIGVPVWAEFVTFAVASAALLMFIRPAIRKRLLKPKVLDSSPRALVGHRAEVLEDVGATSGQVRLDGSIWSARSMDPTHTFAEGEIVSVIDIQGTTAIVWKEA`	142
2	-17.100	`[O] COG1030 Membrane-bound serine protease (ClpP class)`	`ali follow..`	19	290	`......FIAGVILILLEIFLPGGIIGLLGLGAIIASLFLAAGSFTVSLLIASAVSITAFILLTRVLGKRM-ESGYVSNQTRTDLMGKVGITFTPLRP-SGTVIIDDERLDVVS--EGSFTEKDKKVKVIKVEGSRIVVRE..`	436
3	-6.760	`[J] COG0024 Methionine aminopeptidase`	`ali follow..`	17	219	`.....................................................................................GMTLAIEPILNAGSKHTRTLSDRWTAVTVDNSLSAQFEHTVLVTE-TGYEILTDRTK`	274
4	-6.760	`[MU] COG0597 Lipoprotein signal peptidase`	`ali follow..`	8	10	`...LRWLWLVVVVLIIDLGSKYLILQNFALGDTVGAAFSFLADSGGWQRWFFAGIAIGISVTLVVMMYRSKATQKLNNIAYALIIGALGNLFDRLWHGF-DFYVGDWHFATFNL-ADTAICVGAALIVLEG...........`	155
5	-6.740	`[J] KOG4600 Mitochondrial ribosomal protein MRP7 (L2)`	`ali follow..`	12	1	`.......MAMATSMSLNLIGAFKGLSLSSTSSFLRGDLSFSPKTSFTVTLPLENLQAPIPLTIESAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKF------AGKNVGIGKDHTIFSLIDGLVKFEKFG`	130
6	-6.610	`[M] COG2834 Outer membrane lipoprotein-sorting protein`	`ali follow..`	10	3	`...............................................KWLALLFCSFSAIAAPKDTLSERLAMSEGFSATFNQQV--LSPEGKVILTGNGKVDIA--RWETETPDENLLVSDGTTLWHFDPFVEQVTLYRAE`	98
7	-6.410	`[T] KOG4193 G protein-coupled receptors`	`ali follow..`	15	472	`LAAFTWMFL-LYIMLVEVFESEFYLVGYGMPALIVAVSAAVD-SFIGPATLIIMLNVIFLGIALYKMFHHTAKPESGCLDNINYEDNRPFIKSWVIGAIALLCLLGLTWALMYINESTVIMAYLFTIFNSLQGMFIFI....`	641
8	-5.690	`[R] KOG2296 Integral membrane protein`	`ali follow..`	16	105	`...VYWSAQLLTWLILPLLQS---YVTAGNFTILGKIRAAVINNALYYAIYSLCFLAILIYAMFKGVSINIENLKVIVVSASNTWGLFLLVV-----GHGLVELPRSLWHHGNRH...........................`	210
9	-5.570	`[O] KOG2738 Putative methionine aminopeptidase`	`ali follow..`	15	232	`........LNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELIIQKHAQANGFSVVRSYIHKLFHTAPNVKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTD-TGCEILTRRLD`	376
10	-5.380	`[J] KOG3262 H/ACA small nucleolar RNP component GAR1`	`ali follow..`	12	43	`....................................................FLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTIKCGDGV-------QATSFKEGDKFYIAADK..........`	115

FFAS is supported by the NIH grant R01-GM087218-01

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