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Query: [P] COG1629 Outer membrane receptor proteins, mostly Fe transport, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGYCRLLSETLIKCAGAGASMECKGINGRTARTGLAGWVALLLTTSVSALALNVPATAQTVAQASTAPRQISIAAGPLTSALNQLATQTGLQILFDGSIANGKTSRGASGNLTPSQALAAVLAGTGVQSRFAGQNQIALSLAAAPANAAAVAADGTTQLQAITIYGSRNATTLASTSSSIGIVNAEQISDGQIRSFRDSFRRMANVMDGDWADAGFIIRGVSSEGLVPGGAPLATLYIDGVQQTVRGARRGARGLFDVEQVEVYRGPQSTLSGRAAMAGAIYIKTKDPTFEKEAELSTTIATGNLYGTGFMFNTPLVDDQIAIRMSGEIQRSKNDINYPTFERYENYNEFTHDFYYQVRGKVLFEPAEMPETRALLSYSFSHDNPAVRDIGGPKGSIPFSFDEKRGDYQLPVYIEYRPTDVHNVGLEVTHDFSDELKLTSLSAFSYSDADRLSVNYGTPGEIDTYHGYYKEWIASQEVRLNYEGEKWDWVGGVYFSYEDEKNFYDRTIPLTATVKRNQVQHNTQKSFNAALFGEATYEFVPTWKITVGGRLDYTDQDITQNLVRTQPLGGRTTVVTDYAASFSEVNFVPKIGLSKELTDTQTVGITYSQGFRTGGASYDAYQRTAYNYKPEEASTYEIFYKGSFMDERLTINSNVFLTKYSDQQVLMQFDPTDLLSRRIINAASSEAWGFEFEPSFKVTDNLETFASLGYVHTEFKDFNDLNLGNLSGLPFPEAPKWSLGLGARYTFDNGVYVGADAKYTSSYLARLGSLPHDYLKSRWIVNLQAGYKTERWEINAFAQNLLDEKYFVYNDNDIAATLGERRSVGLNMKVKFLast
1 -204.000[P] COG1629 Outer membrane receptor proteins, mostly Fe transport  ali  100  1MGGYCRLLSETLIKCAGAGASMECKGINGRTARTGLAGWVALLLTTSVSALALNVPATAQTVAQASTAPRQISIAAGPLTSALNQLATQTGLQILFDGSIANGKTSRGASGNLTPSQALAAVLAGTGVQSRFAGQNQIALSLAAAPANAAAVAADGTTQLQAITIYGSRNATTLASTSSSIGIVNAEQISDGQIRSFRDSFRRMANVMDGDWADAGFIIRGVSSEGLVPGGAPLATLYIDGVQQTVRGARRGARGLFDVEQVEVYRGPQSTLSGRAAMAGAIYIKTKDPTFEKEAELSTTIATGNLYGTGFMFNTPLVDDQIAIRMSGEIQRSKNDINYPTFERYENYNEFTHDFYYQVRGKVLFEPAEMPETRALLSYSFSHDNPAVRDIGGPKGSIPFSFDEKRGDYQLPVYIEYRPTDVHNVGLEVTHDFSDELKLTSLSAFSYSDADRLSVNYGTPGEIDTYHGYYKEWIASQEVRLNYEGEKWDWVGGVYFSYEDEKNFYDRTIPLTATVKRNQVQHNTQKSFNAALFGEATYEFVPTWKITVGGRLDYTDQDITQNLVRTQPLGGRTTVVTDYAASFSEVNFVPKIGLSKELTDTQTVGITYSQGFRTGGASYDAYQRTAYNYKPEEASTYEIFYKGSFMDERLTINSNVFLTKYSDQQVLMQFDPTDLLSRRIINAASSEAWGFEFEPSFKVTDNLETFASLGYVHTEFKDFNDLNLGNLSGLPFPEAPKWSLGLGARYTFDNGVYVGADAKYTSSYLARLGSLPHDYLKSRWIVNLQAGYKTERWEINAFAQNLLDEKYFVYNDNDIAATLGERRSVGLNMKVKF 833
2 -92.600[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid  ali follow..  16  2.........................PAPHGLSPLSKAFLMRRAFQRRILPHSLAMALSLPLAGYVQAQEVEFDIPPQALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGTGASVDFQGNAITIS---------VAEAADSSVDLGATMITATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGITVSAYDTNNYYARGFSINN----------FQYDGIPSTARNVGYSLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRSELDVSGPLTESNVRGRAVAAYQDKHSFMDHY------------ERKTSVYYGILEFDLNPDTMLTVGADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQLDHKINGYHAPLPAPDNSAKIVAQKYTGETKSNSLDIYLTGPGREHELVVGTSASFSHWEDFINWDGDIGKPDWGTPSQYIDDKTRQLGSYMTARFNVTDDLNLFLGGRVVDYRVTGLN------------------PTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFMP---DSWYRDSSNKLLEPDEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRAEEYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDS---------GKKVSTWEPQDQLSLYTSYKFKGKLTVGGGARWQGKSWQMVYNNPRSSQEDYWLVDLMARYQTDKLSASVNVNNVFDKTYYTNIGFYTSASYGDPRNLMFSTRWDF 815
3 -86.000[P] COG4772 Outer membrane receptor for Fe3+-dicitrate  ali follow..  12  8.....................................................................................................................ALTASLICQESLFAKDKDYTLGKVSTAGKKDRSDYSGQVNLGYSGITAPKSWQDEEVKKYTGSRTVISNKALTQQANQSIEEALQNVPGLQIRNATGPTIQIRGFGAGG--SGHSDATLMLVNGIPVAHIELDIFPVTFQAIDRIDVIKGGGSVQYGPNTYGGIVNIITKPIPNQWENQAAERITYWAKARNAGFAAPPDINKHVGIQAQANWVRGQGFRDN------------SPSSISNYWLDGVYDINESNGIKAYYQYYDFAIAQPGSLSEQD----------KINRFANLRPLNQKGGRSQRFGAVYENRFGDLDRVGGTFSFTYYGQLMTRDYATNYNGWAEVENPVRSINNAFEPKVNLIVNRQTFIMGLRFMTTTFLQRQYLNTNECATKTSVYRNWNNWRNNYTAVYLSDRIEAWDRFFIVPGLRYAFVQYNNENA------SNWMQIPEKDLRKIKHMNNWMPSTNIGFQGDHNVLTYFNYQRSFVP---QLDVLSYGGAEYFTQHFDTVEAGARYT-YKDKFSFNADYFRIWARDFATGQYSVYTSGPMKGNVRPINGYSQGVELELYYRPIRGLQFHAAFNYIDTRVTSHGPLTKGTSYNKHFPFVSPFQFIFDARYNWR-KTTIGISSYFYSRAYSGISNSAAGLLPWYWVWNIQVSQIRHRVTGSLQINNIFNMKYYFTGIGSSPAQPAPGRSVTAYLNYTF 841
4 -80.000[P] COG4774 Outer membrane receptor for monomeric catechols  ali follow..  16  3.............................................................................................................NNRNFPARQFHSLTFFAGL------------CIGITPVAQALAAEGQTNADDTLVVEASKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGIYMRGADTSN---------SIYIDGI----RDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVI-GDTTAVRLNVMGEKTH-----------DAGRDKVKNERYGVAPSIAFGLGTANRLYLNYLHVTQHNGLPGYSAPSAGTATLNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYT-DVSTGVEFTRETQTNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAISPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPG-SGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN--------DGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKN--GKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTFTEGYWVADAKLGYRNRNLDFQLNVYNLFDTDYVASINKSGYRHPGEPRTFLLTANMHF 760
5 -71.100[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins  ali follow..  17  9........................................................................................................................................VSLSVTLGLMFSASAFAQDATKTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTVTGGGDTDISIRGMGSN---------TLILVDGKRQTSRQTRPNSPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLSTVVQENRASGDEQSANFLSDALSLQVYGQTTQRDE---------DEIEHGYGDKSLRSLTSKLNYQLNPDHQLQLEAGVSAQDRE------------NNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDWQDVGQSDTYLQYEENTNK---------------SREMSIDNTVFKSTLVAPIGEHMLSFGVEGKHESLEDKTSN----------KISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKN----------------------------SHFSPRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVSLKPETSINKELSLMYS-TGSGLAASLTAFHNDFKDKITRVACPANGAAPTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKS------GNFAGRPLLQLPKHLFNANLSWQTTDRLNSWANLNYRGKEMQPEGGNDDFIAPSYTFIDTGVTYATDTATIKAAVYNLFDQEVNYAEYGYVE----DGRRYWLGLDIAF 652
6 -58.500[H] COG4206 Outer membrane cobalamin receptor protein  ali follow..  14  4..........................................................................................................................................KATLLTAFSVTAFSAWAQDTSPDTLVVTANRFQQPRSAVLAPVTIVTRQDIERWQSTSVNDVLRRLPGVDIAQSGGSSIFIRGTNSSH--------VLVLIDGVRLNLAGVSGSAFPVSLVQRIEYIRGPRSAIYGSDAIGGVVNIITTRDNPGTELTAGWGSNSYQNYDISTQQQL---GENTRATLIGDYEYTKGFVVAKGGTGMQAQPDRDGFLSKTLYGALEHTFSDRWSGFVRGYGYDNRTD---------------------DAYYSPGSPLIDTRKLYSQSWDAGLHFNGERIQSQLVSSYSHSKDYNYDPHYGRYDTSATLDEMKQYNVQWTNSVVVGHGNV--GAGVDWQKQTTTP-------------GTGYVPEGYDQRNTGVYLTGLQQL-GDFTLEAAARSDDNSQ----------------------------RHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQLYGYYGNPNLNPEKSKQWEGAFEGL--TAGVSWRISGYRNDINDM---------DDHLQKYYNEGKARIKGIEATANFD-TGPLTHTVSYDYVDARNAI---------TDTPLPRRSKQMAKYQLDWDVY-DFDWGMTYQYLGSRYDSDYSARTVKMGGVSLWDLTVAYPTSHLTVRGKIANLFDKDYET-----VYGYQTAGREYTLSGSYTF 614
7 -7.750[I] COG2067 Long-chain fatty acid transport protein  ali follow..  11  150..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMKRIAGTSFPASTIVVNPTLNVDKADGWAVGFNLGTVYEMDENNRFGLS----YRY-SPEFKAKDDYGQEITLPLPDIAEFSGFHKIENTQFAVHYSVQWIGWSAFDKIEFRNLVTSRSSVGALTKGSDGWHYSIGGTYYLNSDWTLRAGYMYDTSAQDSRTSI--------SVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSENDATTHADAILLGLQYSRT............................................ 427
8 -7.080[M] COG1452 Organic solvent tolerance protein OstA  ali follow..  5....................................MSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAINGQKATYSGNVVVVQGKKRIAADN----------------VTLHQQENVVVAEGNVQFSDIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGS-----------TSCPDGDNAWRMRASSIDVDQNEEIATFYNPLEVQNVPVFYLPYLTV-GDTRKTGFLY-----PTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRLNSVFRYLTDFGAGQIKSEYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVR------DFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARV-----LGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLLDDYT----------------------QTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVD-ESANQVSYGASTRFFDERLNIAFGQIFY-LDSKLNPSNKNPDS-------TSDKTSYSAWAVEMDFNFADYLFYHGGIQYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDE--------ALEWLANLT---YTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNI 752
9 -6.710[AR] KOG2193 IGF-II mRNA-binding protein IMP, contains RRM and KH domains  ali follow..  215.GATIRNITKQT----QSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKTLAHNNFVGRNLKKVEQDTETKITISSL--NPERTITVKGAIENCCRAEQEIMKAMSLQSHLTPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFAASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKL----HIRVPASAAGRVIGKGLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQV................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 560
10 -6.570[M] COG4775 Outer membrane protein/protective antigen OMA87  ali follow..  11  1.........................................................................................................................................MKKLLIASLLFGSTTAFAAPFVVKDIRVDGVQAGTE-GSVLATLPVRVGQRATDNDIANYDDVKASREGNTLVVTVMPKPVISNVVIDGNKSIPDEAIKQNLDANGFKVGDVLNRAKLEEFRKGIVEHYNSVGRYNAK-----VEAIVNTLPNNSAEIKIQINEDDVALFEIIFEGNQAFSSSKLEDQMELQTDAWWKLFGNKFDQTQFNKDLETLRSYYLDRGYAQFQSDDKKEARVIIKVKEGDL--TVKSARILGDVGGMSAELAPILDAIQLNGLFRRANVLEVEQRIKSKLGE-------RGYATAQVNVHPTFDEQDKTISDFIVEAGKSYTVRQIRFEGNTSSADSTL-----------RQEMRQQEGAWLSSELVELGKLRLDRTGFFESVETKTSDQVDVIYKVK---ERNTGSIN-----------------------------FGIGYGTESGLSYQASIKQNFLGMGSSISLGGTRN-----DYGTTINLGYNEPYFKDGVSLGGNVFFEEYDSSKSNTSAA-------------GRTSYGGNLTLGFPVNENNSYYLGVGYTYNKLKNIAPEYNRDLYRQSMKYNDSWTFK-----SHDFDLSFGWNYNSLNRGYFPTKGVRANIGGRVTIPGSDNKYYKLNAEAQGF--PLDREHGWVLSSRISASFADGFGGKRLPFYQYY 643

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.