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Query: [S] COG1630 Uncharacterized protein conserved in archaea, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEKIADILIAQLNETLRNVNYEVLLSNWKALPEAERSSVYAVDGSRSVTRLSGTIVYFLSAIAIGSGRSYKLFYANAMQYNHGVSDQVVRMQMETMENMIGYLAEKMLRGEKKLILMDGTLTGSLIRPPVYPEDIKSIAVIRSLIGINDFDNLIYEYVKMLEEHYREVRRKLKDEGTSDAPLLSDVIIDKFRRKYLETRIIGHIRNKVRVKVPSSIIKREGVPLSLLERFLEEGKSLEDALREIKEERVEVVIDKDMVNDAFHILLTYIEYLYSLDKLLEVANLAYIAKSFYTKKLANMLGIPIVDTALLDIVLRRFLKKEKEGYWSFEEPVRIPHEIPEYLINHFKNVKKFAERGVNIGYVRFERGDVIYMVQSTKKIEDILPLILHHRVGGYIRPLQLAHDGAKISYKEARMALDALINYLRNKDPELKVFTKYGRSPLELast
1 -140.000[S] COG1630 Uncharacterized protein conserved in archaea  ali  100  1MEKIADILIAQLNETLRNVNYEVLLSNWKALPEAERSSVYAVDGSRSVTRLSGTIVYFLSAIAIGSGRSYKLFYANAMQYNHGVSDQVVRMQMETMENMIGYLAEKMLRGEKKLILMDGTLTGSLIRPPVYPEDIKSIAVIRSLIGINDFDNLIYEYVKMLEEHYREVRRKLKDEGTSDAPLLSDVIIDKFRRKYLETRIIGHIRNKVRVKVPSSIIKREGVPLSLLERFLEEGKSLEDALREIKEERVEVVIDKDMVNDAFHILLTYIEYLYSLDKLLEVANLAYIAKSFYTKKLANMLGIPIVDTALLDIVLRRFLKKEKEGYWSFEEPVRIPHEIPEYLINHFKNVKKFAERGVNIGYVRFERGDVIYMVQSTKKIEDILPLILHHRVGGYIRPLQLAHDGAKISYKEARMALDALINYLRNKDPELKVFTKYGRSPLE 442
2 -6.950[S] COG2380 Uncharacterized protein conserved in bacteria  ali follow..  23..........VLEESSEIGEVNVETSEWKPINDEENLKIAFIDGVRRTENINSASVVEGAFVSIGAGAMVLSYGKVNSLEDSKELSPYVNELMANLELWVAQQVYKAKMA--DLMITDGTL--------------------------------------------------------------------------------------------------------------------------------------------------------HYVAKAKNLPFIGYVKKHRKIYLYPEHIKVLQEL---------KVGQRTPII---------------LIHSQPTMDSQNKSFDKYTWYVKLNENEGVARLEVPVKLANLTALMPKFASAEFNIPIKYLENYLRRRLGSQSLIRRLIAQRIMER................ 333
3 -5.910[K] COG1695 Predicted transcriptional regulators  ali follow..  14  8.............................................................................................................................................................................................................................................................................................................................................................................................ALVLLSKKPRTLYQM-SKEISTGVQVSHGTLMPMIRKLLQEETRGREKVYHLTERGSRFVE 72
4 -5.900[L] COG1515 Deoxyinosine 3`endonuclease (endonuclease V)  ali follow..  18  10.................RRIQERLARQVTYAPLPPVETVAGLDVAYSGSLAFGAAVVV---------KRTTLEVVETACSVSRIVVPYVPTFLAFRELTPMLRAYIKLKSKPDVILVDGH.................................................................................................................................................................................................................................................................................................................................. 103
5 -4.990[S] COG5323 Uncharacterized conserved protein  ali follow..  10  2...QKSARGKSWAVGLAFRQILAAQDEWLIRARDAQLPPDGMGGRGSGKTRAGAEWVSGMALGLPPFAGKPSGHIALVGETFNDAREVMVDGPSGILSVSRLVRPRYEASRRRLIWDNGAVA--------LFSSEDPDSLRGPQFDAAWCDEL--AKWKNPQETWDMLQFGLRLGDNPRQVVTTTPRAV---PLLKALLTDRTVSMTHMRTAENAGNLAEGFMQTIARRYAGTRLGRQELDGELVEERPGALWSRDRIEQCFEE--PLARIVVAVDPPASSGKVAGIDAEGVGHVLADESMTMAKPHQWARRAIALYHTHEADAIV---EVNQGGEMVAAVLAAEDPSVPVLKRRASRGKWLRAEPVAALYRVRHAGRFPALEDEMCDFAPEGLS------------SPDRLDALVWALGELMLGADHKPRI-RRFG..... 430
6 -4.910[R] COG2346 Truncated hemoglobins  ali follow..  11  40....................................................................................................................................................................................................................................................................................................................................................................TRRFYELMDTLPEAARCDLSGSEAKFYDYLTGYGPPVYV--LRRRHFVAPIGPAERDEWLLCFRRAMDETI............... 123
7 -4.740[S] COG4430 Uncharacterized protein conserved in bacteria  ali follow..  133...................................................................................................................................................................................................................................................................................................................................................................................EFSIPEELQHKFDDLTPGRQRAYILYFSKP-KQSKTRQSRVEKYMQQILN---------------GKGLHD 197
8 -4.570[S] COG2512 Uncharacterized membrane-associated protein/domain  ali follow..  13  236............................................................................................................................................................................................................................................................................................................................................................................IETAALNRIPLSPELCEVLDIIRGHKGR-----ITQKDSKLDYSEVKVSLMLSEL------EKRGLIRKLRNGRENI. 303
9 -4.500[NU] COG4968 Tfp pilus assembly protein PilE  ali follow..  1...................................................................................................................................................................................................................................................................................................................................................................................MIELMVVVA-VIAILSSIAYPSYQHYILKSHRDQ--AKADLVEIAQFAERFRTVNNT.............. 54
10 -4.430[I] KOG3189 Phosphomannomutase  ali follow..  12  1...................................................................................................MAVIPIEERKFPKTLVLVDGTLTPARLSVSPEMLET-RKVVAIGFVGGSDLSKQQEQLSVNGENVIDSFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK--YGLTFSIGGQISFDVDKTYCLQHVEKEGFDTINDYEIFVDP................................................................................................................................. 234

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 3 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.