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Query: [P] COG1910 Periplasmic molybdate-binding protein/domain, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNETSSYTIEEVAGLLKVSKLTVYDLIKKGVLPAYRVGRQMRVDEEDLKQYKTNMRMSQPIAAKEAPKQVQEAEPDGRPNVMISGQDISMDILSKHLENAIQETPLRKYKGSLNSLIDMYQGKCDIVSLHLYDAETGQYNAPYVKRILTGEPFCLINVVLRKAGLYVQKGNPKNIQGWKDLKRADIRIINREKGSGARVLLDEQLGLLGVNPADVVGYGDIVTDHYAAASQVSSGQADAGIGAQHAAHMGSVDFIPLIDEQYDIVVLKKNEQLLKAVKEILNSEDYKANLSHLNGYETKLTGKVILETLast
1 -93.700[P] COG1910 Periplasmic molybdate-binding protein/domain  ali  100  1MNETSSYTIEEVAGLLKVSKLTVYDLIKKGVLPAYRVGRQMRVDEEDLKQYKTNMRMSQPIAAKEAPKQVQEAEPDGRPNVMISGQDISMDILSKHLENAIQETPLRKYKGSLNSLIDMYQGKCDIVSLHLYDAETGQYNAPYVKRILTGEPFCLINVVLRKAGLYVQKGNPKNIQGWKDLKRADIRIINREKGSGARVLLDEQLGLLGVNPADVVGYGDIVTDHYAAASQVSSGQADAGIGAQHAAHMGSVDFIPLIDEQYDIVVLKKNEQLLKAVKEILNSEDYKANLSHLNGYETKLTGKVILET 308
2 -15.900[R] COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain  ali follow..  15  24...............................................................................LYGPGGPHTALKDIANKYSEKTGVKVNVNFGPQATWFEKAKKDA-------LFGASDQSALAIASDFGKDFNVSKIKPLYFREAIILTQKGNPLKIKGLKDLANKKVRIVGKSNTSGTGVWEDMIGRTQDIKQNFRNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPGTAVAIEKDLFNVIAKEGASKETQDFIAYLSSKEAKEIFKKY-GWR........... 249
3 -10.400[R] COG2358 TRAP-type uncharacterized transport system, periplasmic component  ali follow..  10  67..............................................................................................................ASVENLNLLQAGRGELALALGDSVADAWNGVADAGFKAPLKKLAIGNTYPNYIQVVASQAS--GIKTLADLKGKRISV---APKSGTELNARAIFKAAGLSYEDM--GKVEYLPYAESVELIKNRQLDATLAIRDLASTMPITFVAIPADVVAKIIPAGTYDGQEQDVPTVAIDNILVSHSGVSDELAYQMTKLMFD. 275
4 -9.910[H] COG2998 ABC-type tungstate transport system, permease component  ali follow..  13  42.....................................................................................DSGLLDYLLPKFEQDTGYKVDVIATGTGKALKMGENGDVDLVMTHAPKAEASFVEAGFGVL----------KLMYNDFVVVGPESDPAKIADEKNIAKSGAVFISRGDDSGTHKKELGIWAQNKIEPN-FGGYRSIGQGMGPTLNMASEMQAYTLTDRGTWLAYNNFEGDEQLFNPYQVIIPTTQYHAAKVFSDWLVNPKGQQLINEF-KVN----GQQLF.. 268
5 -9.780[P] COG1613 ABC-type sulfate transport system, periplasmic component  ali follow..  20  121.............................................................................................................................................................PYTSTIVFLVRKGNPKAIKDWGDLVREDVQVI-KTSGGARWNFLDDAKAQEYVAQLFKHVPVLDTGARGATTTFVQRGLGDVLLAWENEAYLS-------GPDNFDIVTPSIAEPPVALVDGNVDSKGTRKVAEAYLDYLYSDVGQKIAAK 286
6 -9.510[P] COG4150 ABC-type sulfate transport system, periplasmic component  ali follow..  15  65....................................................................................................DKLTIKQSHAGSSKQALAILQGL---ADVVTYNQITDVQILHDRGNLIPADWQARLPPFYSTMAFLVRKGNPKNIRNWDDLVREDVKLVFPNPKTTYLAAWGATQLADGGDEAKTRDWMKRFLKNVATTTFVERGLGDVLISFESEVNNIR-----YGSDQYEVIVPPVDEFPVAWVDKNVEKNGTEKAAKAYLNYLYSPPAQQVITR 289
7 -8.810[P] COG0725 ABC-type molybdate transport system, periplasmic component  ali follow..  10  30..............................................................................TVFAAASLTNAMQDIAAEYKKEKNVDVVSSFASSSTLARQIEAG----APADLFISADQKW-MDYAADKKAVDTTTRETLLGNSLVVVAPKASEQKPFTIDNKTDGRLAVGD-PAGIYAKEALQKLGAWQTLEPKLAPGED------RGALALVERNEAPLGIVYGSDAVASK--HKKVEYP---AIVEGHKNATVSAFYDYLKGPQASAIFKRY-GFTTK......... 257
8 -8.350[K] COG3888 Predicted transcriptional regulator  ali follow..  12  14.ARGLGIDQFQIEEMMGFSKSTVSEALKD---------------LEEKGIIKRRTIGGKIKHVWLAEYYPYYDEKLLRIGCLRSTEYVKFVSVAKNYSESKGIDLIVRYDDAISLMNDLSQGLLEFALA----------IFTEIIYSISNRNSIIL-------GAVASGGS--GVYKNVNCNCGKILT---SESSSMMILAREFAKTRKISEIAI------FKDPRRAIKDYESFKAEYIVIWEPYASKIMGEKMASFSDVLDGISVSENNRENRTLIEIVRLEDVIDIFAKSTSVSPKTAKASLEN. 292
9 -8.320[P] COG0226 ABC-type phosphate transport system, periplasmic component  ali follow..  14  83............................................................................................FTDLNKKYPNLQINYQSVGSGAGVEQFIQGTVDFGASDMKDEEIQKVQRGVLLLPVTAGGIVLAYNLPGVTELNLPRVVYTDIKTWDALPSQPITVVYRSDGSGTTGVFTKHLAAVSPEWKSKVGEGKSGKGNEGVTAQIKQTQGAIGYIEYGYAKQNNISYATLENKAGKFV-----KYNDESASQTLAAIQLPENLRAFGSYPIVSFSWIMAYK 326
10 -7.860[P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component  ali follow..  13  55............................................................................................ILKDMEKQTGLKVKPFFSSNYSSLVAMGAKQTDLGWF----------NQSGLEAVRRSNGEVFARTFDPSKSVIIVPAD-SKIQSVQDLLKLDFGIGDKKSTSGTLAPMTYVFIPANKKPETCFKT---SANHQANLFAVANGKLDASTNNSTAIGLS-----EGVTDKIRVIWESPTLPEDPLVWRKDIDPVVKEKLRQF............... 253
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.