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Query: [O] COG2077 Peroxiredoxin, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKITLAGTEIEVSGVFPQVGDVVTDFTTVSAKLEDTTLANFAGKRKILNIFPSIDTGICATSVRKFNEQAAKLANTAVLCLSTDLPFAQARFCGAEGLENVFTVSTFRNKDVHKQLGVDIVEGPLAGLTARAVIVLDENNRVLHSELVPEIKQEPNYDAALAVLLast
1 -95.000[O] COG2077 Peroxiredoxin  ali  100  1MSKITLAGTEIEVSGVFPQVGDVVTDFTTVSAKLEDTTLANFAGKRKILNIFPSIDTGICATSVRKFNEQAAKLANTAVLCLSTDLPFAQARFCGAEGLENVFTVSTFRNKDVHKQLGVDIVEGPLAGLTARAVIVLDENNRVLHSELVPEIKQEPNYDAALAVL 165
2 -63.600[O] COG1225 Peroxiredoxin  ali follow..  17  2................PVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFEDAVVFGISRDSLKSHENFKAKLELP--FELLSDADEAVCALFDTIKMYGKDVRGIERSTFLIDRKGVLRQEW--RGVKVPNHVDEVLGAV 151
3 -53.900[O] KOG0855 Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes  ali follow..  15  57...........SSDVNELEIGDPIPDLSLLNEDNDSISLKKITENNVVFFVYPRASTPGCTRQACGFRDNYQELKKAAVFGLSADSVTSQKKFQSKQNLP--YHLLSDPKREFIGLLGAK---KTPLSGSIRSHFIFV-DGKLKFKKISPEVSVNDAKKEVLEVA 209
4 -52.500[O] COG0450 Peroxiredoxin  ali follow..  15  1................MSLINTEIKPFTAQDGKFVTVSEADVKGKWSVFFFYPADFTFVCPTELEDLADNYDVFTGVEIYAVSTDTHFSHKAWHDSSP-KIKYTMVGDPSGQVTNNFEIMRPG---VGLADRGTFLVDPQGVIQFM-EVTAEGIGRNAIELLRKI 152
5 -49.400[O] KOG0541 Alkyl hydroperoxide reductase/peroxiredoxin  ali follow..  20  2...............APITVGDVVPDGTIENDQLQTVSVHSAAGKKVILFGVPGAFTPTCSMSHVPGFEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDK-IRSRRFALLLD-NLKVTVANVESGGETVSSAEDILKAL 162
6 -47.400[O] KOG0852 Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes  ali follow..  14  44...........QLQYTKAVISKPAPQFEGTNKEIVKLSLSQYLGKYVVLLFYPLDFTFVCPTEIIAFSDRIAEFKKTEVIGVSVDSHFTHLAWINTPR-DVKIPLLSDLTHKISKDYGVYLES---SGHALRGLFIIDQTGVLRQI-TMNDLPVGRSVDETIRLV 203
7 -45.100[O] COG0678 Peroxiredoxin  ali follow..  20  1.................MTVKKKVPFVTFRPYRWEDKTSDDFRGKRIILFSLPGAFTPTCSLQLPDFEMLYDEFEKEAIYCVSVNDAFVMNAWGKALG-LQKVQLIPDGSGEFTRKMGMLVAKDNL---SWRYAAVIN-NGVVEQWFEEDDPYGVSSPQNVLETL 173
8 -25.800[S] COG4312 Uncharacterized protein conserved in bacteria  ali follow..  13  24.KEAIHQRDAITAERLALPWVKVDTRYVFDTASGKKTLADLFDGRSQLMIYH-AAGCPGCSLVADHLGGTLAHLNDVTLIAVSRAPLPEIEAYRQRMGWQ--FPWASSFGTTFNHDFRVSFTPDELASGAVDSAFYKDEAGNVYHT................... 192
9 -24.500[S] KOG4498 Uncharacterized conserved protein  ali follow..  8  59...........SGAGIGKGTADSLDTVKVLDLRGNEIPISDWKDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMDGVALVLIGPGSIDQANTFVEQTKFK--GEVYADPNHASYEALEFVSGVSVTFTPKAAGILVAGPGKDISYIRKVISFV............ 234
10 -21.900[R] COG3054 Predicted transcriptional regulator  ali follow..  14  15.........PIMACAHNLEVNQRVPPVGIADRSYKNWNSAQLAGKVRVLLHIAG-RTSAKEKNIEAIKSAKLPHDRYQTTTIVNDAIPGSGMFVRSSIESNKSQFIVDSNGVARNAWQLKEE--------GSAVIVLDKDGRVQWVKDGA---TQQEVQQVVDLL 179
11 -16.000[R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems  ali follow..  15  43......NAAKPQTRGTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLTYSDTLKQLKDVKVVFVSIDTPEIIGKYAKQFNPDFIGLTATGGQPVIKQQYRVVSAKVNQKD--SSGAYLIDKNGEVAIF-----SPYGSEPETIAADV 213
12 -14.500[R] KOG2501 Thioredoxin, nucleoredoxin and related proteins  ali follow..  10  1.............................MSTNVMQVLVSKLVGKTIGLYFGAH--CPPFRSFTSQLVDVYNELATFEVILISTDRDSREFNINMTNMPWLAIPYEDRTRQDLCRIFNV----------LIPALVIIGPEEKTVTTNAREMVSL........... 120
13 -13.100[C] KOG2792 Putative cytochrome C oxidase assembly protein  ali follow..  16  285.........................PFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKL----AILLNPLTFGCLYLYAEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDG--SHNMYLINPKM-----EIVRCFGVEYNPDELSQEL 420
14 -12.200[O] KOG4614 Inner membrane protein required for assembly of the F0 sector of ATP synthase  ali follow..  8  90VQVFQKTKGKLFIAPVSYDKALFFPHLIGTAMDGTKQQNIELRGKTSIVRLF---STASGDKLSSSYFQGIVD-SNVQIIEVNLVENAWANRVPSWRQPFYFECSRGQWPFSVREELFCNNVFSGY-------VFLVDQQLKIRWA--EATPSEKEALWKFAKRL 279
15 -10.600[O] KOG1651 Glutathione peroxidase  ali follow..  12  1............MGASASVPERSVHQFTVKDSSGKDLNMSIYQGK-VLLIVNVASKCGFTETNYTQLTELYRKYQDFEILAFPCNQFLYQEPGTSQERFKAEYPVFQKVRVNGQNAAPIYKFLKASKPTFLGSRFLVGKDGLVRYGTMVTPLSIEVSVLYISKV. 169
16 -9.140[O] COG0386 Glutathione peroxidase  ali follow..  14  5.........................DFQMKDAEGNAVDLSGYRGKVLLIVNTAT-----CTPQYEALQKLYAQYEGLEILDFPCNQFREQAPESSGEGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFFLVNRDGEVRFAPSVTPEEIEADIRALL... 177
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.