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Query: [S] COG2149 Predicted membrane protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKAMRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAGLast
1 -69.800[S] COG2149 Predicted membrane protein  ali  100  1MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKAMRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG 115
2 -36.600[O] COG5264 Vacuolar transporter chaperone  ali follow..  17  119..........EAKVWLANERTFLKWLHVVVLLGSLALALYNS----AGERLGQAFGVVYTLLAIFIGFYAWKLHAKRSQMIKSRSPAPMTDYWGPLIVGTALAISLIVNMSF... 216
3 -35.500[UO] KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion  ali follow..  17  9..........EAKVWLANERTFLKWLHVVVLLGSLALALYNS----AGERLGQAFGVVYTLLAIFIGFYAWKLHAKRSQMIKSRSPAPMTDYWGPLIVGTALAISLIVNMSF... 106
4 -11.200[R] KOG4812 Golgi-associated protein/Nedd4 WW domain-binding protein  ali follow..  11  133...............VGNDGIFMLAFFMAFIFNWLGFCLSFCITNTIAGRYGAICGFIFLVLGLLLFFRGFVNYLKVRNMSESMAAAHRTRYFFLL................... 242
5 -9.660[S] KOG4753 Predicted membrane protein  ali follow..  19  95................ENWRTVLA----AFTLLVVGTGLFVMGTFAIADPQNTSQGVVFFVAGLICFIPGAYHVVYIWLAAK................................. 156
6 -8.110[S] KOG4290 Predicted membrane protein  ali follow..  9  188YDIWLTNGRPNSEFNFSFDEQNTVQLFLLTVVAYAILSIIQSGANFKNRQMPPRSIITMKLIGYSLQCFNVLLFAY------DGQGFFIARIAGEVLRNTSVQVHCLLLIMLAKG 307
7 -7.300[U] KOG3088 Secretory carrier membrane protein  ali follow..  10  150..................KLMYYLWMFHAVTLFLNIFGCLAWFCVDSARAVDFGLSILWFLLFTPCSFV----YRPLYGAFRSDSSFRF------FVFFFVYICQFAVHVLQAAG 238
8 -7.170[S] KOG4544 Uncharacterized conserved protein  ali follow..  15  31IALAHLQERRRIAFKIAEEREKFNWIACGGSLVVVLSALSSF------HHKNLLHVIPIFPMASFIGYKAHFCYGDQLKKISETS.............................. 109
9 -6.760[S] COG4755 Uncharacterized protein conserved in archaea  ali follow..  13  2..................ESSFIGWIKLQKNLLTTLKDMEKKEKTEDMDRLDLILASRTAFQHMMRTLKAFDQWLQDPMVIKH................................ 70
10 -6.760[P] KOG2662 Magnesium transporters: CorA family  ali follow..  12  330LKEYIDDTEDLINIKLGNVQNQLIQFQLLLTAATFVAAIFAAVTAVFGMNLQDSV-LLITGIGCGFLYFGFVLYFKHKKVFP................................. 420
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.