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Query: [S] COG2164 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGERGVEMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTTQVAVEKEENSKDVVELGDVAYWIPGKAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVADGESVVVERALast
1 -76.100[S] COG2164 Uncharacterized conserved protein  ali  100  1MGERGVEMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYFTTQVAVEKEENSKDVVELGDVAYWIPGKAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVADGESVVVERA 131
2 -44.100[S] COG4925 Uncharacterized conserved protein  ali follow..  14  184.EEGETKMRISIQANGETTIYELNDG---KAAKELYEQLPLTIDVEDYSNNEKIFYPPKKLDTTNTPANAQFGTLAYYAPWEDVVMFYDRFGSAGG-------LYELGTVISGGEHIKNMSGTILIEK... 301
3 -12.200[O] COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family  ali follow..  15  52.ELERTIDTYRIRTTTGSILLELLPDDAPGIVEEWRRIYTELENMR--PSEIAMGPLRTELEPSRDEFTYDEDEVIMSLSGDSTHIIISKEPHSAVYGVPRENRGVFARITGGKRTVERLTQDDVVK.... 183
4 -8.940[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family  ali follow..  7.AKELTMTQVKLHTNHGDITLALDAEKAPKSVANFVHY----VKKGHYNGTVFHRVIKGFMIQGGGFEP-ERGSIAM-SATAQFFINVVDNDFHTSPTPQGWGYAVFGKVTEGLDVVDKIRA......... 153
5 -7.310[S] COG3536 Uncharacterized protein conserved in bacteria  ali follow..  10...NNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRGHGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLY............................................ 93
6 -7.160[O] KOG0881 Cyclophilin type peptidyl-prolyl cis-trans isomerase  ali follow..  17  15.DKAWQPHFVTLETSMGEITVELYWKHAPNTCRNFAEL----SRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASIYTNGSQFFITLAPTQWLDGK-------TIFGRVYTGMEVVKRIGM......... 153
7 -7.100[O] KOG0415 Predicted peptidyl prolyl cis-trans isomerase  ali follow..  1.......MAVLIETTLGDLIIDLFVKERPRCSLNFLKLC----KKKYYNLNQFHSIERNYVAQTGDPTGTGKGGESVYMLGSQFFITLGE-----NLDYLDDQHTIFGQVTEGLETLEKLNE-KDIRISHT 159
8 -6.810[O] KOG0883 Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase  ali follow..  13  273YQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRL----CKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWSNRSQFFITFRSCAYLDKK-------TIFGRVVGGFDVLTAMEN......... 412
9 -5.680[O] KOG3259 Peptidyl-prolyl cis-trans isomerase  ali follow..  13  53..ARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQ---FSDCSSAKARGDLGAFSRGQMQKPF-----------EDASFALRTGEMSGPVFT............... 152
10 -5.620[O] KOG0882 Cyclophilin-related peptidyl-prolyl cis-trans isomerase  ali follow..  12  467GGEKVLNKEAIIHTSFGDITIRLFGDECPKTVENFCTH----SRRGYYNGLTFHRVIKSFMIQTGDPSGKGTGGESIWTNGSQFFITVCPADWLDGK-------TLFGEVTAGMSVVQRINQ......... 607

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.