FFAS03 results for COG2370

Query: [O] COG2370 Hydrogenase/urease accessory protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210`
#	Score	Template	Links and tools	%id	First	`MAGSPRSRCERQQFQEGIMLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG`	Last
1	-85.000	`[O] COG2370 Hydrogenase/urease accessory protein`	`ali`	100	1	`MAGSPRSRCERQQFQEGIMLKRLSLAAAALGLTTLPAFAHLNPEEHGSFMAGVSHPFFGADHILAMVAVGIWASQIASARNDRKALWIVPAAFVGTMAVGFLMAVYGVELPFVEPAILASVIGLGLLVAMAARLPTAAAAAVVGAFALFHGHAHGGELGSAGALQFGIGFMIATAILHLAGIALGLGIARFGSAASRTVGALTAIAGLSLAFGG`	214
2	-11.800	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	16	656	`................................LWLSLFLH----------AGILHCLV---SICFQMTVLRDLEKLAGW-------HRIAIIYLLSGVTGNLASAIFLP----RAEVGPAGSQFGILACLARPWRAFFKLLAVVLFLFTFGLLPWID---AHISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIIFQVVFLGLLAGLVVLF..`	822
3	-9.150	`[P] KOG4505 Na+/H+ antiporter`	`ali follow..`	13	1	`MAWSQVEISKPHLAYAIIGGFTSLFMLCSLIIKEKLFLGEATMATATGLIFGITEELARVLLVVEVFAAGALPRAYMLRHWRSMFVMLLPVMIFGWLVSTGFMYALIPRLSFLESLAIAACIVLASSIVFARRVPGHLRNMLLAESGCNDGMAI-IIILYECTFGCVLGAIIGVIARKMIKFSERRGLMDRESFLVFYFVLALFCGGIGTIIGV`	264
4	-8.610	`[S] COG3216 Uncharacterized protein conserved in bacteria`	`ali follow..`	10	6	`LFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVF-PLGSHFAIAAIVCWLISGNM------------------VAAGLGTFVFG------PLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPV----LKPMLCGAVPLGLVFGLLFYGITRCGMTA.......................`	172
5	-8.440	`[T] KOG2289 Rhomboid family proteins`	`ali follow..`	19	113	`................................LLSCMWLH----------AGIIHLLT---NMLSLIFIGIRLEQQFGF-------IRVGLIYLISGLGGSILSSL---FLQESISVGASGALFGLLGAMANKAAALITLLFIIAINLALGMLPRVD---AHIGGFLTGFCLGFVLL.....................................`	244
6	-8.250	`[P] KOG1418 Tandem pore domain K+ channel`	`ali follow..`	10	230	`QWNCGQSNENRCLELITKAFIERSIKVERDIRGEGWRYGNLACKTNLGRVATIIYGLIGIP-LFVLKIFGVRYSIRRCVKRCFRRSKLKRASTIESVASDEMPCEESGISEDEEQITTFPVKWALFIVFF-------FMVVCSLIVSFWEKW------------DFLTAFYFFFVSLSTIGF--GDVIPEHPRTACGNGLLEIKICYISVMIN.`	431
7	-7.920	`[R] COG0658 Predicted membrane metal-binding protein`	`ali follow..`	11	232	`..................................................SGLIHAISGL-HIGIAFSVGYFLGLGMMRFHAQLLWSPFVCGALLAVLYAWL---AGFTLPTQRALIMCLLNVALIMLAFPLSALKRILLTLVAVLLW------------SPFASLSNSFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCLMAPVT..`	379
8	-7.730	`[P] COG0672 High-affinity Fe2+/Pb2+ permease`	`ali follow..`	14	390	`..........................................................GLEALLIVAAIVAYLVKNNHQDKLPLIRQSVVVALIASVLTAFIFANSGQSRELLETMMIAVVMLFSMSYWLLSKAEAIIGLWLTSFLAVYR---EGAETTTSGHLSVLAGFGVGCVILLVAYLVMRFTVVKLPKPFFIFTGGFMYLMAFVFAGKS`	580
9	-7.720	`[K] KOG3794 CBF1-interacting corepressor CIR and related proteins`	`ali follow..`	13	1	`MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSH-------SFLN---HP-LSYPNQ-------KWIAEQTHAQHDRRAEEVAREVIHRTSSPISRDCFAQ------EQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEK....................................................`	144
10	-7.490	`[R] KOG3762 Predicted transporter`	`ali follow..`	10	364	`..EGGGGSENSLLLAMKALASMHILLFFVSVVVMGGGAGHLQDIGGSPVLFGILSVVNHASEIITYFYVFKLINKYGHVRVMYLCLAVNFFRFMALSILDNPWMVLPLQI----QGACLATVWSCASSYISLVAPPHAKQHAQYALVGYHGIGKG------------LGSIIGGSVISIIG----------TRTTFVIYGLICLATCAGSFG..`	557

FFAS is supported by the NIH grant R01-GM087218-01

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