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Query: [S] COG2881 Uncharacterized protein conserved in archaea, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTLKLSQALPESLKSFFIAGAYIQLVSTFLGFFATWLIIAAVMHGLSAFFDGRGEFRRTFEFAGYGFMLSLLGSAVTIPVSLKYVEEATIPTIDLQELSANPEILVKSLVSHFPDSYVYSAIFLNLAVTAWSFLIWTFALKNARNVELKQAAVCAAIPTAIFGVYQVMALVRLLQLast
1 -105.000[S] COG2881 Uncharacterized protein conserved in archaea  ali  100  1MTLKLSQALPESLKSFFIAGAYIQLVSTFLGFFATWLIIAAVMHGLSAFFDGRGEFRRTFEFAGYGFMLSLLGSAVTIPVSLKYVEEATIPTIDLQELSANPEILVKSLVSHFPDSYVYSAIFLNLAVTAWSFLIWTFALKNARNVELKQAAVCAAIPTAIFGVYQVMALVRLLQ 175
2 -13.600[S] KOG2946 Uncharacterized conserved protein  ali follow..  15  102..........................PEFAQVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLTPVAISLIVCRVILLATQTRL----------------------------LFFLRFVTTTIGFAWATYA---SFVFLGQSQPPHRKPLAVYPIFL--FFFIISWLVLSH 217
3 -13.100[U] COG5080 Rab GTPase interacting factor, Golgi membrane protein  ali follow..  15  123.................................IALLGSLSLHFVLRLMSAKNLFFTRTVSVLGYSLLPLVVIAFFKNIFTFNGI----------------------------------AGYALAALACIWCTYAASAMFVGILQVNNMRFLVA--YPIAL--FYGVFAVITVFS 226
4 -11.700[U] KOG3103 Rab GTPase interacting factor, Golgi membrane protein  ali follow..  11  133..MAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVS--RSQVTFGAVASVLGYCLLPMVVLSGINILITIQGT----------------------------------LGLIVSGISIFWCAISASKLFATAFSMDHQQLLIA--YPCAV--LYGGFALITIY. 264
5 -9.620[O] COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase  ali follow..  9  74YKIGRNNHV-------VWDEAHFGKFGSYLGKMLVGLSGYLAGYNGSWDFPSGEVYPDYIDYVKMRLFQAMFSSLC-VPLAYFTGRAIGFSVWLFTILVIFENSYATLGKFILLDSMLLFFTVSSYFCLAWWLWLCLTGLNLGCAISVKMVGLFIISVVGIYTISELWNLLSDRS 269
6 -9.210[O] KOG3359 Dolichyl-phosphate-mannose:protein O-mannosyl transferase  ali follow..  8  81YKIGINNHV-------VWDEAHFGKFGSYYLRHEFYH-LGKMLVGLSGYLAGNGSWDDYLDYVKMRLFNASFSALC-VPLAYFTAKAIGFSVWLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKS 275
7 -8.110[S] COG5197 Predicted membrane protein  ali follow..  15  176.............GSFNPEDLYYKLSSTLAFVCLDLLILKLGLYLLIDSKIPSFSLVELLCYVGYKFVPLILAQLLTIAFGVFLLRSVKFNLLSRSGAEDDIHVSISKSTVKKCNYFLFVYGFIWQNVLMW............................................ 311
8 -7.520[R] COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives  ali follow..  10  73...................................................................................................RDPQPLGKVAHDLAKKRGWSAQVAEGRVFGQWASMVGGQIADHAFPVGLNNGVLSVTAESTAWLRIMQAQLLAKIA 151
9 -7.270[T] KOG4193 G protein-coupled receptors  ali follow..  16  451........INRTDQPIACAVFAALLHFFFLAAFT-WMFLEGLYIMLVEVFESEHSRRKYFYLVGYG-MPALIVAVSAIMLNVIFLGIALYKMFHHTAILKPESGCLDNINYEDNRPFIKSWVIGAIALLCLLGLTWAFGL-----MYINESTVIMAY---------LFTIFNSLQ 635
10 -6.950[R] KOG2745 Mitochondrial carrier protein  ali follow..  13  170......................................YTSIVGSVAEIWKSEG-------IAGFGLVPKLLGDLACLVLSSSTIYILNKYIIKDKLGRQYNSGFTQFAVSSLLYPLQVVSTCSAV................................................. 252
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.