FFAS03 results for COG3030

Query: [R] COG3030 Protein affecting phage T7 exclusion by the F plasmid, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD`	Last
1	-74.700	`[R] COG3030 Protein affecting phage T7 exclusion by the F plasmid`	`ali`	100	1	`MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD`	158
2	-9.360	`[S] COG5473 Predicted integral membrane protein`	`ali follow..`	19	157	`......FWTSVTTTEQGWNLILVGNLVGFVFAV-VVLSISVVTFPLLLDRDVGALTAMETSVRATLANPVPVALWGLIIAAGLVI---GSIPIFVGLAVIMPIF......................................................`	250
3	-9.030	`[S] KOG4753 Predicted membrane protein`	`ali follow..`	19	99	`...............................TVLAAFTLLVVGTGLF-------------MGTFAIADPQNTSQGVVFFVAGLICFIPGAYHVVYIWLAA..........................................................`	155
4	-8.590	`[S] COG3216 Uncharacterized protein conserved in bacteria`	`ali follow..`	7	70	`....AIAAIVCWLISGNMVAAGLGTFVNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLMLCGAVPL---GLVFGLLFYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHR...................`	205
5	-8.510	`[S] COG1297 Predicted membrane protein`	`ali follow..`	20	14	`LTLRGLILGALITVVFTASNVYLGLKVGL--TFASSIPAAVISMAVLR---FSGANILENNMVQTQASAAGTLSSIIFILPGLLMIGYWSIGGILGVLYTIPLRRVMVVQ................................................`	131
6	-8.310	`[S] COG5658 Predicted integral membrane protein`	`ali follow..`	14	82	`CFRLLLVLLTIIQMSIIVYALGYDIPTGRLSLVTAGAFMFVVAAYIQYSKLTMIGFKKIDAWSRNLL---RKITTVTLNIAGTICFILALFMRNDPSYLMLAML......................................................`	187
7	-8.290	`[S] COG0398 Uncharacterized conserved protein`	`ali follow..`	15	67	`SFLLMILQAIAAPLPAFLITFANASLFGAFWGGSLSWTSSMAGAFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTIL--VCRLLPFVPFDPISYAAGLTSIR.....................................................`	173
8	-8.040	`[H] COG1767 Triphosphoribosyl-dephospho-CoA synthetase`	`ali follow..`	17	192	`......VRTQALPVFNRVVQEHDDTHLALLQTL-LHLMAWNDDTNLVSRGGLEGLYYVQQQAQKLLWQGGVLVEGGIEAMQSL--LSPGGSADLLAVTWFLSHFPA....................................................`	296
9	-7.690	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	16	666	`.....ILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLAS-EVGPALFVELFQSWQILARPWRAFFKLLAVVLFLFTFLLPGFISGLFLSFAFLPYIS.....................................................`	791
10	-7.370	`[S] COG2259 Predicted membrane protein`	`ali follow..`	17	6	`................................IGLLILRLVLGLTLAAHGRIPGTARWFESIGMKPGTFHATVAATTEISAGLGLAA-GLLTPIPAAGFVS.........................................................`	81

FFAS is supported by the NIH grant R01-GM087218-01

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