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Query: [P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MNYLALLVPVALAMGFVGLLAFFWSLRSGQYDDLDGAAERILLDDEEDEGPLPDPVRDGTASRRQRSPKEDGESKLYSGVSNAKHGLast
1 -79.200[P] COG3197 Uncharacterized protein, possibly involved in nitrogen fixation  ali  100  1MNYLALLVPVALAMGFVGLLAFFWSLRSGQYDDLDGAAERILLDDEEDEGPLPDPVRDGTASRRQRSPKEDGESKLYSGVSNAKHG 86
2 -7.550[O] COG4736 Cbb3-type cytochrome oxidase, subunit 3  ali follow..  11  12....YAFFTILFTLFLYAYIFSMYRKQKKGIMDYERYGYLALNDALEDELIEPRHKKVHDNGIKES.................... 73
3 -7.200[S] COG4836 Predicted membrane protein  ali follow..  18  1MSVLGQQAAIGIVVHLIFIAVTWWALQAVNIDPLKVVQARLLM........................................... 47
4 -7.110[S] COG3296 Uncharacterized protein conserved in bacteria  ali follow..  11  18IAHLSTFAGYLIPFGNIIGPLVVWLMKKDESEFVNDQAKEAL............................................ 59
5 -6.910[U] COG5058 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor  ali follow..  18  358FVLIGALQLVNLYWLFLIFRVLYRILWRGILKDDRS-------DSESDEESDESSTTPTDSTPTKKD................... 417
6 -6.840[I] KOG3071 Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme  ali follow..  13  183MYSYYGLSVFPSMHKYLWWKKYLTQAQLVQF--SYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSKAYFTAANGV.. 290
7 -6.760[S] KOG4526 Predicted membrane protein  ali follow..  7  14....KVALGVHFSVSGVSISGFYIAIKNN---DVESLLEKYQIPWFSSKENPNPSLDLKLEEQGSVTSDNKTKQLAKSAGGA.... 89
8 -6.370[R] KOG2945 Predicted RNA-binding protein  ali follow..  14  9.........VALMFPAIDVSTFTFGVKFYIMDNSGNNRYELLFMDDDDSSGLAQPQIAAVVAAPKKPEPAKAPKAPKSKSEKEN.. 85
9 -6.370[S] KOG3312 Predicted membrane protein  ali follow..  10  5FADTLLIVFISVCTALLAGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMK.. 89
10 -6.140[P] COG1930 ABC-type cobalt transport system, periplasmic component  ali follow..  17  1MKKTLMLLAMVVALVILPFFI-----HGGEYGGSDGEAESQIQAIAPQYKPWFQPLYEPASGEIES.................... 62
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.