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Query: [S] COG4066 Uncharacterized protein conserved in archaea, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIRSSDIPEKMTEMQLLEMLKKEASSVHIKDIMSASVYLREDARYLPPREQKEFIERFTRAFFNRIRDIKNDKNIYQGHVDTAGLKEFIDFLDQQLSQAKTENERCFQKIARIITIYVTFVRKEPVHPVGTRFPGGFTVRREGNVFYCPVKDRQINTPGALCRFCVSIQDHDISLast
1 -91.600[S] COG4066 Uncharacterized protein conserved in archaea  ali  100  1MIRSSDIPEKMTEMQLLEMLKKEASSVHIKDIMSASVYLREDARYLPPREQKEFIERFTRAFFNRIRDIKNDKNIYQGHVDTAGLKEFIDFLDQQLSQAKTENERCFQKIARIITIYVTFVRKEPVHPVGTRFPGGFTVRREGNVFYCPVKDRQINTPGALCRFCVSIQDHDIS 174
2 -7.630[K] COG2345 Predicted transcriptional regulator  ali follow..  10  21ILLILLERAPVIASDIAEQLSTVGVRRHLDNLVEENLAEAANPRQLTDKGRSIFGHEYDSLAAAALATLRE-------VGGDDAVRQFARKRIETIVEGITPADVTDQSIEDTAKSLVEAFSRHGYAATVDATRNGLQLCQHH----CPISTVATEFP-ELCEA.......... 190
3 -7.490[R] KOG3824 Huntingtin interacting protein HYPE  ali follow..  10  276........NTLSLGQTRAILESGIPGKSIREHNEVIGM-DAALRFLNCSLLSKEHDEISIDDILEMHRRVLGNADPVERFTPVSPEYVMEQLKDIVDWLNDESTLTIDPIERAAIAHYKLVL---VHP----FDGNGRTVETRAEYYASLHVANLGDLRPFVRYVAKHSEASI. 467
4 -7.290[C] COG4802 Ferredoxin-thioredoxin reductase, catalytic subunit  ali follow..  12  1...............................................................................MSEEEVDKVYRRLNQEVEKSGYHLNPDVEFTKELVR-------------------GLLANERRYGYWSCPCRLSADNKEEDLDIICPCYYRDP.. 74
5 -6.130[S] COG4855 Uncharacterized protein conserved in archaea  ali follow..  16  21.................................................................................................................................................YVCAEQGKDTD-AVAICIVCLCTE..... 46
6 -5.980[C] KOG3456 NADH:ubiquinone oxidoreductase, NDUFS6/13 kDa subunit  ali follow..  10  1.........................................................MNRLLQQSVSRGPLAVRASSTITTKPPTPNQITKNNAQFDKVTHTGQAWDQSDYRLQRFDISKKSVNPNVAMHLIDQRPPEDCGDKRVVFCDGGHPALGHPKHACGYC......... 118
7 -5.960[R] COG1719 Predicted hydrocarbon binding protein (contains V4R domain)  ali follow..  10  1LLKKVAENGNCFMEALFHVLRFGFEAYG----IDNAPVVRMIGRDIGKCLSANFESNTPEALFREIATFMEFHGDCRVSVLMGDSPALQVEDDFKARVMPAIGKPLCVLREGILEGVLKEKLGKECGVLETE---------------CYGTGH------TRCLFEI........ 144
8 -5.920[R] KOG4602 Nanos and related proteins  ali follow..  12  232....................................................................................................................LCNFCKHN--H----------QLKTPDGVVVCPILRHYV----PVCKYCPLNGGQQ.. 291
9 -5.910[B] KOG3118 Disrupter of silencing SAS10  ali follow..  14  135..EDDEFDARMEEQEALRLQRKRLEKVSETDAAAIEELVQQISPDLPRTELLKILEAKHPEFQLFLDELNQLKPQLNEIKEKLKTYPSSQLLQAQCT---------LSTYISFLTFYFALLKDGEEHPI............................................. 279
10 -5.900[S] COG4391 Uncharacterized protein conserved in bacteria  ali follow..  13  1........................................................................................................................MAGHSIPHFQND-GGHRVIEIGVKEFMCTGASVPFDHPHKVCSYC......... 54

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.