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Query: [S] COG4575 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPRKTTANAAKDELLAEFQALVADTEKLLQSTADVAGDQAEEIRGKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIGIAAGVGFLLGLLVSRRLast
1 -48.100[S] COG4575 Uncharacterized conserved protein  ali  100  1MPRKTTANAAKDELLAEFQALVADTEKLLQSTADVAGDQAEEIRGKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIGIAAGVGFLLGLLVSRR 109
2 -11.600[S] KOG4744 Uncharacterized conserved protein  ali follow..  16  98.ETKEQAKDKAYETKEKAKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKEYGED....................... 182
3 -9.670[T] COG3103 SH3 domain protein  ali follow..  14  85LSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQ--FMYGGGVLGLGLLLGLVLPSR 198
4 -8.310[R] COG4980 Gas vesicle protein  ali follow..  8  24LTAPSSGKQLREKMKTNYDSFEETIKRLKSDGLA-LKDQLIKAAKESTDVIKDVGGELQTSIKKWQEEIKPHQQDLQKEIAD........................... 104
5 -7.850[U] KOG3838 Mannose lectin ERGIC-53, involved in glycoprotein traffic  ali follow..  11  376.PVGAVSRSDVDLLLTNQNMLLSSIREIRQLVGD-INVRTDNIQTNQKHAPTAQIQSTGYDVQTLIAEMRDGMNQVKQGITHVGQR-PTGNSVTVVQLLLVFIYNVFKN 502
6 -7.780[C] COG0711 F0F1-type ATP synthase, subunit b  ali follow..  11  45........ASAEAAKKEQADTKNLVEQELSAAKLQAQDILDAANKRRNEVLDEVKAEAEELKAKIIAQGYAEVEAERKRVQEELRLK-VASLAVAGAEKIV........ 136
7 -7.670[M] COG2825 Outer membrane protein  ali follow..  12  43.AVAKQLENEFKGRATELQGMERDLQTKMQKLQRDGSTMKASDRTKLENEVMKQRETFSTKAQAFEQDNRRRQAEERNKILSRIQD--VKSVATKGGYDVVI....... 142
8 -6.910[C] COG2811 Archaeal/vacuolar-type H+-ATPase subunit H  ali follow..  13  8...........SEAITTIKKAENDADRLIQEAREKSSQLLDDARNRSAELLEKAEREASEKGDEIIAEAEERARKEAIEISGKAKRE...................... 83
9 -6.900[S] COG1963 Uncharacterized protein conserved in bacteria  ali follow..  11  62.............LEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEKQKKLKELLGHQPIEVF-----FGGLTGILLT.. 150
10 -6.880[R] KOG4331 Polytopic membrane protein Prominin  ali follow..  16  344...NANITQVLAASNNQFEQLESRIQHEIDKETYSAQNMLKQIGDDLFLVAETISTQLRKTFEALYSTVSYVSDPKKTPTLKYMQYSWYASLVITSLFGVLYGICGRRP 459
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.