FFAS03 results for COG4691

Query: [R] COG4691 Plasmid stability protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170`
#	Score	Template	Links and tools	%id	First	`MASMTIRNLDDGLKKRLRIRAAAHGRSMEDEARDILRAALSTGENRPANLAAAIRSRIVPLGGVELELPPARPCAAYRISPGDHSRHQCSVGAAGPGALRRGRDLACRATNGGCIYHDGNGKLNCSTACGSCPTDADGKSSRQRLSRSFVRILPGVFYRSTARRRTLSVA`	Last
1	-98.000	`[R] COG4691 Plasmid stability protein`	`ali`	100	1	`MASMTIRNLDDGLKKRLRIRAAAHGRSMEDEARDILRAALSTGENRPANLAAAIRSRIVPLGGVELELPPARPCAAYRISPGDHSRHQCSVGAAGPGALRRGRDLACRATNGGCIYHDGNGKLNCSTACGSCPTDADGKSSRQRLSRSFVRILPGVFYRSTARRRTLSVA`	170
2	-11.700	`[S] COG4877 Uncharacterized protein conserved in bacteria`	`ali follow..`	23	4	`.KQVPLR-LDPAVYDAIAKWAADEARSTNAQIEMMLREQLRKAG..............................................................................................................................`	45
3	-9.600	`[S] COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters`	`ali follow..`	20	81	`.GKFNAR-ISPELHALASEAAAAQGISLNQFVEQAIQHEVHT................................................................................................................................`	120
4	-8.800	`[R] COG4710 Predicted DNA-binding protein with an HTH domain`	`ali follow..`	25	23	`DMATSIR-LSPEMEQRLNYLASHTGRTKAYYLREIIEHGIE.................................................................................................................................`	62
5	-7.470	`[K] COG3905 Predicted transcriptional regulator`	`ali follow..`	25	42	`MTAFTVR-LPDEVAEKLDQLAEKLDRSRSYMAVQAIEDFVAREE..............................................................................................................................`	84
6	-6.880	`[S] COG4423 Uncharacterized protein conserved in bacteria`	`ali follow..`	22	1	`MA-LNIKD--PEVDRLAAELADRLHTSKTAAIRHALSAQLAFLESRAGDREAQLLD..................................................................................................................`	53
7	-6.210	`[R] KOG2695 WD40 repeat protein`	`ali follow..`	25	43	`.................................................................................................................................SGHGDDESPSTSSGTAGTSSVPELPG-FYFDPEKKRYFRLL`	82
8	-5.970	`[S] COG3226 Uncharacterized protein conserved in bacteria`	`ali follow..`	17	25	`.................................................................................................................................GRKASRQGSEQRRQAILDAAMRLI-AVRHRAVAAEAQVPLS`	70
9	-5.950	`[R] COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II`	`ali follow..`	10	166	`..........................................................................................................DPVRDDMALIVEGSKGLVVISGCGHSGIINIARHAMELRGSKIAALIGGFHLRGAKKELLDDVV`	229
10	-5.880	`[E] COG0066 3-isopropylmalate dehydratase small subunit`	`ali follow..`	29	92	`..............................................................................................................................FGCG---------SSREHISTSFADI----FYNNCFKNGILPVV`	135

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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