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Query: [R] COG4801 Predicted acyltransferase, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKHLLVPDNTRIDTSRIVVEGDVIVGNHSSIQYSISGDMVIMGEGVAVSGDVVACSDTRIDMWSKMGSNVEVGKNAYLGEFVSIEGKLTVEGDLDVGKEVKIKGGFVAKGWIVVRNPVPVIMFLFLYIREMMRLGRGEEIEKALEELFDESEEEHESESREPAEKILIIPTGTKITPEVIEVGGDAVVGNNCYLIGNLKAQSVETGNALILKGSIYSEGKINIGENSTIYGNLSSKGQVNIGRNTKVFGGIKAESVLLHENARVEGTIKAPSGLSFLRDAAEMPILADVNALGKVIPREVKEPVPRDGLLKAPEIIKIDSLIKTSAKAKNGFVPGREGMSARTVALGRTRRTGGVRRLRRRHEAGEHQSLast
1 -81.300[R] COG4801 Predicted acyltransferase  ali  100  1MLKHLLVPDNTRIDTSRIVVEGDVIVGNHSSIQYSISGDMVIMGEGVAVSGDVVACSDTRIDMWSKMGSNVEVGKNAYLGEFVSIEGKLTVEGDLDVGKEVKIKGGFVAKGWIVVRNPVPVIMFLFLYIREMMRLGRGEEIEKALEELFDESEEEHESESREPAEKILIIPTGTKITPEVIEVGGDAVVGNNCYLIGNLKAQSVETGNALILKGSIYSEGKINIGENSTIYGNLSSKGQVNIGRNTKVFGGIKAESVLLHENARVEGTIKAPSGLSFLRDAAEMPILADVNALGKVIPREVKEPVPRDGLLKAPEIIKIDSLIKTSAKAKNGFVPGREGMSARTVALGRTRRTGGVRRLRRRHEAGEHQS 370
2 -22.700[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase  ali follow..  17  102................................PSAVIAEDAKLGHNVSIGANAVIESGVQLGDNVVIGAGCFIGKQARLGDNTKLWANVTIYHKVEIGSDCLIQSGTVIGAD---GEWIKIPQLGSVRIGDRVEIGACTTIDRGAL-------------------DDTVIEDNVIID-NQLQIAHNVHIGYGSALAGGTIAGSTRIGKYCIIGGASVINGHIEIADGVTITGMGMVMRSI.................................................................................................................................. 295
3 -22.200[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase  ali follow..  16  1.........................................MIDKSAFIHPTAIVEDGAVIGANAHIGPFCIVGPQVEIGEGTVLKSHVVVNGQTKIGRDNEIYQFASIGEV-------------------------------------NQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAVAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGDVPPYVIAQGNHATPFG....................................................................................................... 196
4 -16.900[M] COG1664 Integral membrane protein CcmA involved in cell shape determination  ali follow..  13  3...................................................................................................................................................................VVEKLVINGSGSSKGG---TFQSVEINGSGTVAGDVECDTFSFNGNGKADGSVKA-KAVTISGSGKIHGDVEA-ESIRMNGTGFIQGEVSAKQLKIAGSSTFGGTVKADG................................................................................................. 107
5 -15.400[J] KOG1461 Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)  ali follow..  10  313KASDATQLPSAHVG-ASYVIGHATNIGSGTKILNSVIGNGCSIGSNVVIQGSY-IWNNVTVEDGCEIRNAI-VCDEVKVCAGAIVKPGVVLSFKVVVGRDFVVPAYSQVS.................................................................................................................................................................................................................................................................... 419
6 -15.100[J] KOG1462 Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1)  ali follow..  18  354RLVDVTVSERALVGADCM-VNEGTTIKDNSNIKKSIIGKNCVIGKGVVVSNSI-LMDNIVVEDGVRLESCI-VASGAQIGAKSKLRE-CEIGVDHRVEAGRIARGERLVDME.................................................................................................................................................................................................................................................................. 461
7 -13.900[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase  ali follow..  12  99QKEGFRVVPPAAVRQG-------AFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQST................................................................................................................................................................................................................................................................. 212
8 -13.100[Z] KOG3121 Dynactin, subunit p25  ali follow..  17  16TASGNKVSRHTVLGSQNIILNGKVIVQSGAIIRGDL--ANVRTGRYCVIGKNSVIRPPYKQFSKGIAFFPMHVGEHVFVGEGAVVSA-ATIGSYVYIGKNAIIGRRCVLKDCCVIEDGAVLPPETTV................................................................................................................................................................................................................................................... 140
9 -12.400[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)  ali follow..  18  261....................................LRGRLKHGQDVVIDVNCIFEGKIELGDNVEIGANCVIK-NAKIGANSKIAPFSHLE-GCEVGENNQIGPYARLRPQAKLADDVHVGNFVEI--------------------------------------KNAAIGKGTKA--NHLTYIGDAEVGSKT----NFGAGTIIANYDGVHKHKTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDGKLALARSRQTI........................................................................................................ 444
10 -11.800[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)  ali follow..  13  242..................................................AYRENSPGLWIGQNTYIDPSAHIEAPAVIGNNCRIGARVQIEAGTVIGDNVTIGADANLKRPI---------------------------------------------------------------------VWNGAIIGEEAQLSACVISRGTRVDRRAHVLEASVVGSLSTVGEEAQISPGVRVWPSKKIESGAILNINL...................................................................................................................... 374
11 -11.700[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily  ali follow..  16  12.....................................................VVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDY---GRLILEAGSNLQDGCIMHGY----------------------------------------------------------------CDTDTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVAGFQGEARQLLVGSPARVLRQVTDQELH................................................................................................................ 150
12 -9.490[G] COG0448 ADP-glucose pyrophosphorylase  ali follow..  13  330PVDNSLISGGCVITDASIVLFDRIKINEGSQIDHCVVLPQVTIGKNCKLKRCI-IDRHSVIPDGMEIGVDLELDRQFRVSSGGVVPSMLKKLNGEEVASEAHLD.......................................................................................................................................................................................................................................................................... 439
13 -9.140[GMO] KOG1460 GDP-mannose pyrophosphorylase  ali follow..  16  303IHPSAKVHPTAKIG-PNVSISANARVGPGVRLMSCIILDDVEIMENAVVTNAI-VGWKSSIGRWSRVQAEGVYNSKTILGDSVAVEDEVVVTSSI-VLPNKTLNVSV....................................................................................................................................................................................................................................................................... 409
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.