FFAS03 results for COG5130

Query: [UT] COG5130 Prenylated rab acceptor 1 and related proteins, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170`
#	Score	Template	Links and tools	%id	First	`MSALSLSITKVSETFSEIYASRAQYLSGFKSVGEFLDVRRISRPRNFSEAQSRISFNFSRFSSNYLAIIAMLVIYALIRNPLLLIVIGIGVGGVYGIRKLQGADLQLSHRVISNQNLYVILACVLIPLGLFASPIETIIWLVGASCVCVFGHAAFFEPPVESAFETVEQQV`	Last
1	-90.000	`[UT] COG5130 Prenylated rab acceptor 1 and related proteins`	`ali`	100	1	`MSALSLSITKVSETFSEIYASRAQYLSGFKSVGEFLDVRRISRPRNFSEAQSRISFNFSRFSSNYLAIIAMLVIYALIRNPLLLIVIGIGVGGVYGIRKLQGADLQLSHRVISNQNLYVILACVLIPLGLFASPIETIIWLVGASCVCVFGHAAFFEPPVESAFETVEQQV`	171
2	-80.000	`[U] KOG3142 Prenylated rab acceptor 1`	`ali follow..`	20	9	`.TSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRS--DNLFLDEEAA.`	175
3	-8.910	`[V] COG4452 Inner membrane protein involved in colicin E2 resistance`	`ali follow..`	8	281	`.......................................AVTTPADQYQLTDR--------ATKYAILLIALTFMAFFVHPMQYLLVGLSLVMFYLLLLALSEHT-----GFTVAWIIASLIGAIMNGIYLQAVLKGWCNSMLFTLALLLLDGVM................`	392
4	-8.180	`[TU] KOG4076 Regulator of ATP-sensitive K+ channels Alpha-endosulfine/ARPP-19 and related cAMP-regulated phosphoproteins`	`ali follow..`	13	1	`MVRTRKWMLSTTIIAMSSSNSEQKVDVAKLSPEEQKLFRLYRLPQRKDLLVQKLQQGRKYFSGDYAL........................................................................................................`	69
5	-6.640	`[I] KOG3059 N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis`	`ali follow..`	14	9	`..........................TKEVKWQKVLYERQ-PFPDNYVDFLEELRKNIHARKYQYCSVCVFVVIWWYMDE-WLLGTGLASSLIGYVLFDLIDGGEGRKKSGQTRWADLKSALVFITFTYGFSPVLKTLTESVAMSVFMLLGHLIFFDYGANAAIVSSTLSL`	179
6	-6.460	`[K] KOG4477 RING1 interactor RYBP and related Zn-finger-containing proteins`	`ali follow..`	13	380	`.RSFETPLNDASIFNSKSCQIPDYMINREAAQKIFIVANGY--PAYFEEFPRRV.....................................................................................................................`	430
7	-5.930	`[I] COG0671 Membrane-associated phospholipid phosphatase`	`ali follow..`	10	129	`.................IDQVLKPFFNRTRPLPRLVDVDGRSFPSGHAAGGVVFYFYLAFLQYRWQIYLGATLWVGFIGIASMYCRV....................................................................................`	204
8	-5.800	`[OU] KOG1239 Inner membrane protein translocase involved in respiratory chain assembly`	`ali follow..`	9	184	`LNVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFFFAIRNMA-TLWFTDLTTTDTTYILPLLTAVTFLIMVESNMQEGLEGNPVAGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTS-NLFTLVYGLTLRRPDVRKLL.......`	355
9	-5.630	`[I] KOG2822 Sphingoid base-phosphate phosphatase`	`ali follow..`	11	114	`.................LGNCIKDVVSAPRPSCP--NAMEYGLPSSHTLNTVCLSGYLLHYVLSSLEYESVSIQYYGFALACLLVALIAFGRVYLGMHSVVD---IVSGLAIGVLILGLWLTVNEKLDDFITSKQNVSSFWTALSFLLLFAY...................`	256
10	-5.440	`[U] KOG3202 SNARE protein TLG1/Syntaxin 6`	`ali follow..`	14	136	`YQQQDVMLDGVYDTIGNIRGQAALMGEELGQQADLLD----TTNSKLRRGMKRLKDFTIASADSKSGCCITVLIIILIALLVLVIVL....................................................................................`	225

FFAS is supported by the NIH grant R01-GM087218-01

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