FFAS03 results for COG5294

Query: [S] COG5294 Uncharacterized protein conserved in bacteria, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110`
#	Score	Template	Links and tools	%id	First	`MKKIVILIISVLLLGGIIGGVYYFKNANKIGADASYVKITKDPTKSNEISFNNNYTLPAYDENGKETEVTFSADKELRKGAYLKLYIKEDKGVTSFEEVPEKEVPAKAAEKLK`	Last
1	-60.800	`[S] COG5294 Uncharacterized protein conserved in bacteria`	`ali`	100	1	`MKKIVILIISVLLLGGIIGGVYYFKNANKIGADASYVKITKDPTKSNEISFNNNYTLPAYDENGKETEVTFSADKELRKGAYLKLYIKEDKGVTSFEEVPEKEVPAKAAEKLK`	113
2	-9.950	`[S] COG4939 Major membrane immunogen, membrane-anchored lipoprotein`	`ali follow..`	11	3	`LKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDTDGTYKLEEKNFDDKGWKGFMSIE----VKDGKITKANYDYKNK-EYLKQLSDSLVKGQSASSVE`	137
3	-8.630	`[S] COG4907 Predicted membrane protein`	`ali follow..`	13	1	`MKKNILRIFLFLIISIISFSASF-----SISDLDVEAKLQKDGSMLVSEAVTYDID--EVTENDGVYRIKLYSKNYNNVRTF-KFVYTLPEAIKVYNDVAQ............`	137
4	-8.320	`[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance`	`ali follow..`	16	2	`VKKAIVTAMAVISLFTLMG-----------NRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNE................................`	73
5	-7.620	`[R] COG5633 Predicted periplasmic lipoprotein`	`ali follow..`	15	1	`MRKGCFGLVSLALLLLVLLAAGISAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLESAVTLYGSANFLGAHKVRLYLY.........................`	124
6	-7.400	`[O] KOG4710 E3 ubiquitin ligase, VHL component (von Hippel-Lindau tumor suppressor in humans)`	`ali follow..`	8	93	`..............................GEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTH-NQTELFVPSLNVDGQPIFANITLQVVRSLVKPENYRRLDIVRSLYEDLE`	189
7	-7.370	`[O] KOG0176 20S proteasome, regulatory subunit alpha type PSMA5/PUP2`	`ali follow..`	9	6	`..................................................TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI.`	67
8	-7.210	`[O] KOG0181 20S proteasome, regulatory subunit alpha type PSMA2/PRE8`	`ali follow..`	4	4	`..................................................ERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV.`	65
9	-7.200	`[P] COG4454 Uncharacterized copper-binding protein`	`ali follow..`	14	1	`MTRLKLALLLTALATPAFAGGTHSGGDNVMAIGEPGDKSKVTQTIQETPDGKMMFTPAKFEKKGKTVRFAVKNVGELDHEFIL..............................`	88
10	-7.170	`[O] COG0638 20S proteasome, alpha and beta subunits`	`ali follow..`	9	4	`..............................................GPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKV.`	69

FFAS is supported by the NIH grant R01-GM087218-01

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