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Query: [G] COG5309 Exo-beta-1,3-glucanase, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRFSNFLTVSALLTGALGAPAVRHKHEKRDVVTATVHAQVTVVVSGNSGETIVPVNENAVVATTSSTAVASQATTSTLEPTTSANVVTSQQQTSTLQSSEAASTVGSSTSSSPSSSSSTSSSASSSASSSISASGAKGITYSPYNDDGSCKSTAQVASDLEQLTGFDNIRLYGVDCSQVENVLQAKTSSQKLFLGIYYVDKIQDAVDTIKSAVESYGSWDDITTVSVGNELVNGGSATTTQVGEYVSTAKSALTSAGYTGSVVSVDTFIAVINNPDLCNYSDYMAVNAHAYFDENTAAQDAGPWVLEQIERVYTACGGKKDVVITETGWPSKGDTYGEAVPSKANQEAAISSIKSSCGSSAYLFTAFNDLWKDDGQYGVEKYWGILSSDLast
1 -104.000[G] COG5309 Exo-beta-1,3-glucanase  ali  100  1MRFSNFLTVSALLTGALGAPAVRHKHEKRDVVTATVHAQVTVVVSGNSGETIVPVNENAVVATTSSTAVASQATTSTLEPTTSANVVTSQQQTSTLQSSEAASTVGSSTSSSPSSSSSTSSSASSSASSSISASGAKGITYSPYNDDGSCKSTAQVASDLEQLTGFDNIRLYGVDCSQVENVLQAKTSSQKLFLGIYYVDKIQDAVDTIKSAVESYGSWDDITTVSVGNELVNGGSATTTQVGEYVSTAKSALTSAGYTGSVVSVDTFIAVINNPDLCNYSDYMAVNAHAYFDENTAAQDAGPWVLEQIERVYTACGGKKDVVITETGWPSKGDTYGEAVPSKANQEAAISSIKSSCGSSAYLFTAFNDLWKDDGQYGVEKYWGILSSD 389
2 -20.300[G] COG3934 Endo-beta-mannanase  ali follow..  14  5.......................................................................................................................................FLGFNYWPRISNIK--EIEEIRRDFELMSGTNTIRAFIL--KIEIFLEEANRHSIKVLLTLIVGDKVDQTKRFIEDVVKSFKQNNAILGWILTNEILVRIPQNDNIFLRWLRELYNYIKRIDDQHLISVGDN-HNFLRPENVKGIVDYASPHIYQYDQDPIRHSIR------YFMILEYDRSAGLPVILEEFGFPTAVYSEESH---ARFIGLILRGALVYGADGALIWCFSDFPREDDEPYL-ELTFGIIRQD 295
3 -12.100[KR] KOG1267 Mitochondrial transcription termination factor, mTERF  ali follow..  11  495...................................................................................................................................................................AHISHIRLYDAA----HLLTVLSKTKIRVIIGF--------------------LQSDLQTELLRHGSVSSTVPSSVSMLLPAIESIYSVLVASNLHTHIKVSTPHGD-------------IFLDTFP---------------------------------------PSQA........................................................ 590
4 -11.300[G] KOG2024 Beta-Glucuronidase GUSB (glycosylhydrolase superfamily 2)  ali follow..  10  209FNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQ--NGKPFYFHGVNHEDADIRGKGFDWPLLVKDFNLLRGANAFRTYPYA----EVMQMCDRYGIVVIDEC--NVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEP----ASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSN--YAADKGAPYVDVICLNSYSWYHDYGHLELIQLQLATQFENWYKK--YQKPIIQSEYGAETIAGFHQDP--TEEYQKSLLEQYHLGLDQK-LIWNFADFMTEQSPTRVLGNKKGIFTRQ 612
5 -10.900[G] COG1874 Beta-galactosidase  ali follow..  10  10.......................................................................................................................................WYGGDYNPEQ------EKEVWDEDIRMFKGIDVATLNVFSWALNQQIDRLYENGIYTCLATWMAKKYPDAERMADRLGERYKDHPGVLIWHVSNEYLQQKYGTLQNVLECFKLERDALKKHTPNLPVTTLMGTYKELDYFKWGKEMDVVSWDNYPAYDTPVSFTAMA-------HDLMRGLKSGQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVMFFQ-----LRRSVGACEKYHGAVIEHV 365
6 -10.800[G] COG3867 Arabinogalactan endo-1,4-beta-galactosidase  ali follow..  14  192............................................................................................VEEQGGNDVIPDPVEADIFVERVDGIPDDFMKGVDISSIIALEQSGVTF--YDDHGNVQDIFQTLQE----AGVNYIRINNDLEKAIEIGKRATKNGMRVLANFWETLSFEDKKQALKESVKTMLDEGDIGMVQVGNET-FVGETNWEKMSELFNEGSRAVREVDETILVALFTNPETPGRYETIAQRLDVFASSYYPFWHGTLNN------LTTVLSHVADT---DKLVMVAETSYTYTREDGDGH-ITVQGQGTAVRDVIEAV................................ 504
7 -10.700[S] COG5373 Predicted membrane protein  ali follow..  10  1MLEAIALLAFVMALAAFLGGRRSAERLDREIESLKAEIARLAKEGMGEPGPDLATGRPSEAGVPSVAGTEATADGPWSRAREGAGTSHDESAAGRESGDGAIDGPVAPSAAAARAESLESRIGGRWPVWVGGLALALGGYF---------------------------VQ-YSIEAG---LLSPAVRLTLAAIFGL---------------------------ALGVAGEVIRRRDVPAIADRFRNAMIPGVLTAAGAVTLFGVV-----------------YAAYGIYDFIGTGAA---VLLALVSLATVGLSLLHGQALAGLGLLA-P---------VSSGEPRPWVLFGFLAVAWLATLAASRL-RRWS................. 291
8 -8.260[G] COG3469 Chitinase  ali follow..  11  2...........................................................................................NGKQVMVGGLSLLLVGTELGAFGSTAQAATDDASVMPDISNKQVLVGYSWKSSGKDGYQQGTSADIALKDTPKAYNVVDV-INDSDFRAQVGALNKEGRAVLLAL-KAGDEQAFANEIIRQVETYG----FDGLDIDLE--ITAGDNKTVIPAALKIVKDHYKAQGKNFLITMAPEFPYLKPGTSLANYYDYIAPQLYNQGGDGVWVDETNQWIAQNNDTLKESFLPANKFVF---GLPANVDAAATGYVKDPQIVQNVFNRLQAKGTPV---------WS................. 323
9 -7.660[G] COG2730 Endoglucanase  ali follow..  13  27..............................................................................................TMGGMIASPASAAGTKTPVAKNGQLSIKGTQLVNRDGKAVQLKGISSHGLQWYGEYVNKDSLKW-LRDDWGITVFRAYIDNPSVKNAVEAAKELGIYVIIDWHILNDGNPNQNK-KEMSSLYGNTPNV-IYEIANE--NGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGT--WSQDVNDAAD-ANVMYALHFY---------AGTHGQFLRDKANYALSKGAPIFVTEWGTSDASGNGGVFLDQSREWLKYLDS..................................... 292
10 -7.330[S] COG3147 Uncharacterized protein conserved in bacteria  ali follow..  7  1MASKFLVGTIVLVALGVGQKKHYQDEFAAIPLVPKPGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPSRMASNNVELDPIPVETPKPKPVEKPKPQPKPQQPVVAASTPTPAPQPVADDKPAPTGKAYVVQLGALKNADK---VNEIVGKLRS----AGFRVY------TSPSTPVQGKITRILVGPD------ASKDKMKGSLGELKQISGLSGVVM.................................................................................................................................................................. 219
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.