FFAS03 results for COG5328

Query: [S] COG5328 Uncharacterized protein conserved in bacteria, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160`
#	Score	Template	Links and tools	%id	First	`MTGSDQTRAKLIDIELDESIGRSTPDVEHERAVAIFDLIEENSFQPVNDSGAGPYRLKLSLAEQRLVFAVAREDGTAVVTHILSLTPLRRIVKDYYMICESYYDAIRSSTPSHIEAIDMGRRGLHNEGSQTLMDRLSGKIDIDFDTARRLFTLVCVLHWRG`	Last
1	-96.300	`[S] COG5328 Uncharacterized protein conserved in bacteria`	`ali`	100	1	`MTGSDQTRAKLIDIELDESIGRSTPDVEHERAVAIFDLIEENSFQPVNDSGAGPYRLKLSLAEQRLVFAVAREDGTAVVTHILSLTPLRRIVKDYYMICESYYDAIRSSTPSHIEAIDMGRRGLHNEGSQTLMDRLSGKIDIDFDTARRLFTLVCVLHWRG`	161
2	-5.590	`[S] COG4876 Uncharacterized protein conserved in bacteria`	`ali follow..`	16	114	`...............................................................................................................TKKEAIERAKEIAAHKGTEVIVHLADGSVQ....................`	143
3	-5.240	`[O] COG4826 Serine protease inhibitor`	`ali follow..`	13	68	`.ETGDHENVFFSPHSISASMAICYEGAEDTTKEQISNVFYFPSNKTVLKVRMERINDKINSVNSDYELQTANA---------LWVQEGYPVKETYIHNVQKYYDG-------EVTNLDFSRDTINEWVEARTNDKIKDLVPEDAITADARLIITNAVYFNG`	217
4	-5.150	`[J] COG0268 Ribosomal protein S20`	`ali follow..`	16	26	`.....................................................................................TRLKNITKAVREAAAN--NAANEALKVANKSIHAMRGFIKKQTASRRVSRLALLVN....................`	84
5	-5.140	`[S] COG1422 Predicted membrane protein`	`ali follow..`	7	33	`...............................RQSMGEAVGVIMDPVLSLVGQENFHLILLVMAIITAL------ASLIQKYTIDWELMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPM----------AYISIISLPL..`	145
6	-5.110	`[H] COG0302 GTP cyclohydrolase I`	`ali follow..`	21	125	`.................................................................................VVGLSKIARVVDIFAQIADSIQRILKPRGVAEAEHMCMAMRSIRKQGSSTITTTFTGDFKEKADQQVRFMTLI.......`	211
7	-5.050	`[S] COG5381 Uncharacterized protein conserved in bacteria`	`ali follow..`	14	55	`........ATFFPGNGADDGLSQRDTIKGSVSYIANELLE-NAVKYSTTDHDCPITITLHLYDHKLIFETSNISPLP------TTIDYENFIKVLLEA-ELYMERLEKSALEDCEASQIGLLTMINDYQAQFGWRFV-----PVSGSEDLIKVTVMTHLG.`	196
8	-4.580	`[H] KOG2698 GTP cyclohydrolase I`	`ali follow..`	27	219	`.................................................................................ILGLSKLARIVEIFSQIAVAVTQAVQPAGVA-VEGMCMVMRGVQKINSKTVTSTMLGVFRDDPKTREEFLNLV.......`	305
9	-4.450	`[B] KOG1745 Histones H3 and H4`	`ali follow..`	15	59	`..............................................................................TELLIRKLPFQRLMREIAQ--SSAVMALQEACESYLVGLDTNLCVIHAKRVTIMPK--------DIQLARRI...........`	131
10	-4.420	`[B] COG2036 Histones H3 and H4`	`ali follow..`	15	58	`..............................................................................TDLLIRKRPFQRMVRDLCKGREGVIVAFQEAVENFLTSLDAYRCVLHAKRVTLMPK--------DICLVYKI...........`	129

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster