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Query: [T] COG5409 EXS domain-containing protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst SANSMRFGLLFGAGLPLAIEAACYYNATEQSSYLLQIWGGFFLVIFAFVLFDLDCYVWEKTRVNYMLIFEFNQRKSLNWRQHLEIVGAVFFIFSLFFFLCMRNFFPGFTIYFPALFLGVVGTFLIAPVIVPYWRMRRYLIIQLIRVFLSGLSTVHFQDFFFADQMVSLTYACGNISLFFCLYKRLWRQPQLCNSSHSPLLGFFTTLPGILRVFQCFRRYSDSLKSFPHLVNALKYIFNILAQMFLSLWRIHPGLKYRVLYTIFAGVNSLFSYTWDILMDWNLLVRKDGRWQFREHRILKQLWPYIIAMILNFIVRSSFIFYCIFPNHIQHSSGISFFVTLAEIMRRCMWNILRVEHEEIYNRENLRAARELKPLDFVKPHSDVFVSHQISSDKNYTDDEDSMDDQTDVDEAQFSLast
1 -115.000[T] COG5409 EXS domain-containing protein  ali  100  1SANSMRFGLLFGAGLPLAIEAACYYNATEQSSYLLQIWGGFFLVIFAFVLFDLDCYVWEKTRVNYMLIFEFNQRKSLNWRQHLEIVGAVFFIFSLFFFLCMRNFFPGFTIYFPALFLGVVGTFLIAPVIVPYWRMRRYLIIQLIRVFLSGLSTVHFQDFFFADQMVSLTYACGNISLFFCLYKRLWRQPQLCNSSHSPLLGFFTTLPGILRVFQCFRRYSDSLKSFPHLVNALKYIFNILAQMFLSLWRIHPGLKYRVLYTIFAGVNSLFSYTWDILMDWNLLVRKDGRWQFREHRILKQLWPYIIAMILNFIVRSSFIFYCIFPNHIQHSSGISFFVTLAEIMRRCMWNILRVEHEEIYNRENLRAARELKPLDFVKPHSDVFVSHQISSDKNYTDDEDSMDDQTDVDEAQFS 414
2 -80.700[U] KOG1162 Predicted small molecule transporter  ali follow..  21  383HMVTFFVGLFTGCFISLFVIYIILADQVSYLETVYPVFSVFALLSLHMFMYGCNLYMWKNTRINYTFIFEFAPNTALRYRDAFLMGTTFMTSVVAAMVIHLILRASGFSDTIPGILLLIFICVLICPFNTFYRPTRFCFIRILRKIVCSPFYKVLMVDFFMGDQLTSQIPLLRHLETTGCYFLAQSYNTCKNGRYYREFAYLISFLPYFWRAMQCVRRWWDESN-PDHLINMGKYVSAMVAAGVRITYARENNDLWLTMVLVSSVVATIYQLYWDFVKDWGLLNPKSKNPWLRDNLVLRNKNFYYLSIALNLVLRVAWIETIMRRVSPVQSHLLDFFLASLEVIRRGHWNFYSGE........................................................... 755
3 -9.510[S] COG4628 Uncharacterized conserved protein  ali follow..  7  22..................................................................................................................................................................................................................................................................................................................TLLQELVDFYGW--ILDTAMRFNCFHTKPSIASSVKYLNKTEWAREKLENFYLYRFKRMPRASSLPPRARTFPHGLHPKEPMALTVDSILKSQAKAASAHKERTSRSR 132
4 -9.000[S] KOG4102 Uncharacterized conserved protein  ali follow..  11  71........................................................................................................................................................................................................................................................................................................................................................RHVHFHAGVIDNEHMNRRKSKCCCIYRKPHPFGESSSSTDDECEHCFGHPEVRTRNRLEKQRIQEQQNGC 140
5 -8.070[S] KOG3154 Uncharacterized conserved protein  ali follow..  9  47...............................................................................................................................................................................................................AMWDFGQC-KRCTGRKLARFNLLKELRVNTGFGGVVLSPVGRQCVSREDYDLIKRKGL--AVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCELSCVEALSAALILCGEKETAE-----------LLLGKFKWAFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQIPKQPPALEEHVKKDGESGDESEEDDEDGL 243
6 -7.630[S] KOG1590 Uncharacterized conserved protein  ali follow..  11  1.....................................................................................................................................................................................................................................MNASEKLSQKAAQSVTRRFITWLKSPDFRKYLCS-------THFWGPLSNFGIPIAAILD-LKKDPRLISGRMTGALILYSSVFMRYAWMVS---NYLLLGCHAFNTTVQTAQGIRFVNFWYGKEGASKQSVFENIMQAAK............................................ 132
7 -7.170[S] KOG1589 Uncharacterized conserved protein  ali follow..  12  1.......................................................................................................................................................................................................................MSATPPTTPAPTAAASAGKGLHSRAYNGLIKACDKYVPPKMRPLWMHPAGPKTIF--FWAPIVKWSLVIAGLSD-LTRPADKISPNGCLALGATNLIWTRYSLVII---NYSLFAVNLFVSLTQLFQLGRYYNYQWEQSRLE......................................................... 138
8 -7.040[S] KOG4032 Uncharacterized conserved protein  ali follow..  3  12....................................................................................................................................................................................................................................................................NFRVIVEKIFN--WQVEHGMGGRNGQQVAIEIMDYTYCVSNENITQGELVEVLEELMDQEFNTLCDDDSIPEICRNLLRYKLMAQQNQFPQIEAELSKLPAGKEWLRPDVKITYTPIDGDSSSDEDMDDSDEEDDNEMGQGDEETPSGSGRMTR 171
9 -6.920[R] KOG3116 Predicted C3H1-type Zn-finger protein  ali follow..  11  1....................................................................................................................................................................................................................MQC-RNMSNSKDE-----KSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNA-----------YGQKEEGPSRWQEKREL---KRQMYLMSTEKAVRL---GERKDKTMSASAVGSSASAASQCQKCFQAGHWTY-KNERVYISRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKH 180
10 -6.220[R] KOG4095 Uncharacterized conserved protein (tumor-specific protein BCL7 in humans)  ali follow..  11  5................................................................................................................................................................................................................................................................................................................................SVRAETRSRAKDDIKKVMAAIEKVRKW-------EKKWVTGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREPNGFPSDASANSSLLLEFQDENS 92
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.