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Query: [S] COG5426 Uncharacterized membrane protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKILFIGESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRQGNIDVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMIGGYLSFTGIEAKANYKNTVLAEVLPVDMLDVDDRVELPQGCKAVNTAVEHVITQPFSEWPPLLGYNKLIAKENSQVLAEINGDPLLVMGTYHKGKVCCFASDCSPHWGSPQFLQWEHYATFWCNVLHTIKKLast
1 -103.000[S] COG5426 Uncharacterized membrane protein  ali  100  1MKILFIGESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRQGNIDVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMIGGYLSFTGIEAKANYKNTVLAEVLPVDMLDVDDRVELPQGCKAVNTAVEHVITQPFSEWPPLLGYNKLIAKENSQVLAEINGDPLLVMGTYHKGKVCCFASDCSPHWGSPQFLQWEHYATFWCNVLHTIKK 245
2 -21.000[G] COG4813 Trehalose utilization protein  ali follow..  11  5INTVVWGENIHEHINETVRS------IYPNGMHNTIADALNQNPEINATTATLQEPEHGLSQDRLDKTDVLVW------------GHKDHGAVQDEIVERVAKRVWEGMGLIVLHSGHFSKPFKTPCALKWREAGERERLWTINPRHPIAAGLPEHFELENEE------------MYGEQFSVPEPLETVFISWEVFRSGLTWRRGAGNIFYFRPGH----ETYPTYHDANVQKVISNSVKWAYN 224
3 -20.000[S] COG3828 Uncharacterized protein conserved in bacteria  ali follow..  14  4.KALIAWGG-------------WEGHTPERSANVIRALLQRNGFDVTLGQGTAM------ADPQLSSFDLIVP-------------AITMSTIEKAELQNLTAAVREGTGLGGFHG--TMGDSFRNEPDYQFMTGGQWPGNIIDYRVAITQPDDPITKGVGDFAYRSEQY--------YMHVDPSNEVLATTTFTDAPVVWKRRYGAGKVFYSSLGHT-----ADEFAVPEMALIVERGLLWAAR 214
4 -19.300[S] COG4878 Uncharacterized protein conserved in bacteria  ali follow..  12  58.KFLILFDKNEQNSSEIKNN--------------IEQMLKYMKKTAVVEEKNNV-------QTVDPSYRAVILTFEDI--------------DDFKSLSSVMNYAQNGGNVLFAERPVMGDAL-----------SSISNEIGIKTVSDMGESDGMTLLSNVLIKGNGVNVSKDIVSDYSLKVTLNNNSKLLGIDNKIPMMWQTKFGSGNIMVFNGT............................. 227
5 -15.200[G] COG3934 Endo-beta-mannanase  ali follow..  9  291..IIRQDGSEKMAAKVIKEFSQKTKDIDLKVPRRDSAILVPSWFYRNFQFVPEQDRRWDFARVLNQAFAFARLSNIQVTFVREDDQNLSDYKLLTTTWRKLLKIVENGTSVYF-------STYTLTHMSATHLWEELFGVMPNNPAGSRGVKIPERVRLLENNLVLDLGQTNM-----YTYSFKEKDAKVIGENSNIGVAFLAKRGKGNVILSTVPLE---SSNYETMKENRISFYNYLAK.... 530
6 -12.900[S] COG4285 Uncharacterized conserved protein  ali follow..  10  1MNVLIYNGNGASKICL-------------LRTFQSLLPFVVPLYAMRFVDASTLEKE-----PWPASTALLVMPG---------RDMGYCSSFNETIYRKITDFVKRGGAYLGLCAGGYFGSAVVDFRMPDSDLNVV-PTFPGFTYDSEDGARRASIIVDGMQSSPVHTHIYFNGGGSFLETENYSNVKVVARFEKSAAIIYVKVGKGNVVLTGIHSAEGSPILDKRDEKTRLELLSYILKLL.. 238
7 -12.200[G] COG1874 Beta-galactosidase  ali follow..  12  386LSYALLDARVQAKVAIVFDWENRWATELSSGPSKALDYVKEVHNYYAALFDENIPVDMIGVDEDLSKYEIVIAPVL--------------YMVKSGYADRVKEFVQNGGTFVTFSGIVNEHDLVTLGGYPGE-LRDLLGIWVEEIDALPPEEKNQIVITNDTGSLTGTYECRL-----LFDIIHSEGADVLAEYAGTPVITRHAYGKGKAYYVGTCPD--------------QAFLTDFMKTVCA 603
8 -10.400[S] COG5617 Predicted integral membrane protein  ali follow..  8  497............................................................TKIISGQPNVVVLYIGQPS---------------KEEESMLWKFIKNGGTVIWVPET----------------KGEFLGIKAEIRAISNDELRSSLFNVSRFSPFSYNHRS------WYAPVFSSNIVRPLISVGNYTLIGEVRIGNGTLYLAGGNLIFH---ALSYKSSYEISIIRALIGNMD. 640
9 -10.200[O] KOG2754 Oligosaccharyltransferase, beta subunit  ali follow..  8  36.LLGAVCASGPRTLVLLDNLNV------RETHSLFFRSLKDRGFELTFKTADDPSLSLIKYGEFLYDNLIIFSPS-------------VEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDE--PTIVGKSSLNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFPDKPITQYPHAVGKNTLLIAGLQARNNARVIFSGSAVQKAAPGSQRYSQTGNYELAVALSRWVFK 301
10 -6.950[E] COG3340 Peptidase E  ali follow..  10  12.NMLLMSGSKYQNTDYLVHTLPWLQDFLADYQGKTVAFVPYAGVRQSYDEAILSVHRAEKHAEIIEKADVIAIGGGNTFCLLKGMYEHHLLPLIREKVQSGTPYFGWSAGANVAGRSIMTTNDMPITYPPSFDALNLFPHQLNPHFISGKPAGHNGESREERLAEFLIVNPTANVY------ALPEGTALHIQGQQARVL-----GQHDVLLFSENMQ........................... 231
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.