FFAS03 results for COG5489

Query: [S] COG5489 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120`
#	Score	Template	Links and tools	%id	First	`MVRARKRRKRRLKMATIGTFKKTNANEFTGEIVTLSVQAKGVRIVPDTRASGDNAPSHRVVVGKAEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIYANLFADEEGEGHSLIWSRPNRRNGE`	Last
1	-77.000	`[S] COG5489 Uncharacterized conserved protein`	`ali`	100	1	`MVRARKRRKRRLKMATIGTFKKTNANEFTGEIVTLSVQAKGVRIVPDTRASGDNAPSHRVVVGKAEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIYANLFADEEGEGHSLIWSRPNRRNGE`	121
2	-8.440	`[S] COG3785 Uncharacterized conserved protein`	`ali follow..`	12	13	`....SREVTMIASKFGIGQQVRHSLLGYLGVVVDIDPVYSL-PDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQ---LSSELQDEHPEQPSMDELAQTIRKQLQ.............`	116
3	-6.370	`[L] COG3727 DNA G:T-mismatch repair endonuclease`	`ali follow..`	14	1	`MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRV------QDASLPGRPDFVVDEYRCVIGCFWHKVPATRTEFWLEKIGK-NVERDRRDISRLQELGWRVLIVWECALRGREK`	124
4	-5.610	`[S] COG3390 Uncharacterized protein conserved in archaea`	`ali follow..`	10	24	`..............................................FRDETDQYAPQYLLTPTGAKVNRI-KEDIGTDSEYWRGRVSDPT--GSFLVYAGQYQPEAAQFL...........`	92
5	-5.260	`[S] COG3099 Uncharacterized protein conserved in bacteria`	`ali follow..`	7	3	`..............MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHDLNPDFFAEVVISEDGEINDVFARILREKDHKLCHIIWRE.......`	111
6	-4.990	`[J] KOG3323 D-Tyr-tRNA (Tyr) deacylase`	`ali follow..`	9	48	`............KILNLRVFEDESGKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSLEQLRKTYRPELIKDGKFGAYMQVHI---QNDGPVTIELESPAPGTAT`	154
7	-4.950	`[Q] KOG1399 Flavin-containing monooxygenase`	`ali follow..`	18	1	`.MAPAPSPINSQHVAVIG-------AGAAGLVAAREL---------------REGHTVVVLDREKQVGGLWVYTPETESDELGLDPTRPIVHSSVYKSL......................`	77
8	-4.940	`[T] COG5170 Serine/threonine protein phosphatase 2A, regulatory subunit`	`ali follow..`	7	1	`MDDIEDSLDQWKFAQCFGDKGDVEDITEADIISAVEF-----------------DHTGDYLATGDKGGRVFERNHSKKGCEYKFFTEFQSHEPEFDYLKSLEIEEKINKIRWCKRTNRA..`	104
9	-4.690	`[R] COG3607 Predicted lactoylglutathione lyase`	`ali follow..`	17	80	`..............................................................SREEIDEMIATALASGGSSWK----PVQDHGFMYAGSFQDPDGHVWELVHMTGQG....`	130
10	-4.620	`[J] KOG2988 60S ribosomal protein L30`	`ali follow..`	18	1	`MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSKAKLVIIANNTPPLRKSEGVHHYNGNNIELGTACGRLFRVC----TLAVTDAGDSDIILSVPSES...................`	112

FFAS is supported by the NIH grant R01-GM087218-01

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