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Query: [R] KOG0562 Predicted hydrolase (HIT family), from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHVRKDCASVSIVLLFQVTFFSLRLVEPEPSVAFGGAASAGQERCGSERSPVAGLQRGISRGAEHAKAPPARHLQGLRINKPEDQEALELIQHRAVCALHKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGHLVGHLQDPKSVCQRVRLGNQFFPTAGYRTSELAYCFDFVDFYEYKKQMEVDKLAYIRDELQRKLNDKRNFLIESDRAVVMKADYPKSQYHFRVVAKEEFRDITQLTEAQLPLLDHMMDLANQIIEKQKHLESRNFLIGFKVNTFWNRLNLHVISNDFYSMAMKRISHWNSFNTELFMPFQIAYMMLSVQGSIESISEETYNNLQEKTPLRCNQCEFVTNMLLDLKAHLYQHWQRKEDERDQKKKVDKIIQMISETKLDEAEAKPKLLNEEEPIQAQPVAAIAQYPNEHLGKPLTPQQQPGKQQAQNVYDKNINGPSVNMMNQNNPNNPFRNTPHLNRQSQKPPHPRSGPRGPMAPWTGPRFPCHQQQNRFRPPGFNACRQPYPPYHSGHQQFPNASSVGGGQTGLPGQGQGPRPKWNSNKIFNQQNRQNTVQAQPQAQNQQTNQQQIQNSNKNQTPKKKPWKNRLQPVGKVQNQGGANRDPAPPSNSKPSLast
1 -148.000[R] KOG0562 Predicted hydrolase (HIT family)  ali  100  1MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHVRKDCASVSIVLLFQVTFFSLRLVEPEPSVAFGGAASAGQERCGSERSPVAGLQRGISRGAEHAKAPPARHLQGLRINKPEDQEALELIQHRAVCALHKLYAQLEKENSISRLPKSLKDELLAKPLICNQCEFVARNLPSLKGHLVGHLQDPKSVCQRVRLGNQFFPTAGYRTSELAYCFDFVDFYEYKKQMEVDKLAYIRDELQRKLNDKRNFLIESDRAVVMKADYPKSQYHFRVVAKEEFRDITQLTEAQLPLLDHMMDLANQIIEKQKHLESRNFLIGFKVNTFWNRLNLHVISNDFYSMAMKRISHWNSFNTELFMPFQIAYMMLSVQGSIESISEETYNNLQEKTPLRCNQCEFVTNMLLDLKAHLYQHWQRKEDERDQKKKVDKIIQMISETKLDEAEAKPKLLNEEEPIQAQPVAAIAQYPNEHLGKPLTPQQQPGKQQAQNVYDKNINGPSVNMMNQNNPNNPFRNTPHLNRQSQKPPHPRSGPRGPMAPWTGPRFPCHQQQNRFRPPGFNACRQPYPPYHSGHQQFPNASSVGGGQTGLPGQGQGPRPKWNSNKIFNQQNRQNTVQAQPQAQNQQTNQQQIQNSNKNQTPKKKPWKNRLQPVGKVQNQGGANRDPAPPSNSKPS 685
2 -35.100[R] KOG4359 Protein kinase C inhibitor-like protein  ali follow..  14  3...........................................................................................................................................................................................................EEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHMPPSISHLHLHVLAP-VDQLGFLSKLVYRV-NSYWFITADHLIEKLRT.............................................................................................................................................................................................................................................................................................................. 182
3 -28.800[S] KOG3969 Uncharacterized conserved protein  ali follow..  12  30.............................................................................................................................EILGADSSHKSL-PDGSQGILLANKSPFSEEKSDIEKLLATAQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVTRPYIEKYQLNL-----------NWVYNCLEKRSEVDKIVFEDPDDIKWDGKTLENLYVLAICHRHGLKSVRDLTGDDLEMLYNMRDKSLEAINQKYGLKTDQIKCYFHYQPSFYHLHVHFINLKYDAPASTTMSAIL---------LDDVINNLELNPE........................................................................................................................................................................................................................................................................................................... 284
4 -26.600[T] KOG3275 Zinc-binding protein of the histidine triad (HIT) family  ali follow..  18  26...................................................................................................................................................................................................................................................................EIPCKFIHEDDKCVAFHDVAPQAPTHFLVIPRKPIAQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVIGKHGAQSVYHLHLHFLGG............................................................................................................................................................................................................................................................................................................................................... 118
5 -26.400[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases  ali follow..  9  14...................................................................................................................................................................................................................................................................EIPANIVYQDELVTAFRDISPQAKTHILIIPNKLIPTVNDVTAQDEISLGRLFTVAAKLAKDEGIAED--VNCNKHGGQEVFHLHMHLVGG............................................................................................................................................................................................................................................................................................................................................... 107
6 -24.200[S] COG5075 Uncharacterized conserved protein  ali follow..  10  117............................................................................................................................................................................................WPATPIHIKKYEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLK------------------WVNNILYEGAESERVVYKDDGFLILPDGMNLDSLYLVAIYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYAVHPDELRILVHYQPSYYHFHIHIVNIKHPG-------LGNSIAAGKAILLEDIIEMLNYLGPEGYMNKT----------------TYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK............................................................................................................................................................................................................................................. 350
7 -22.500[FR] KOG3379 Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family  ali follow..  16  9..............................................................................................................................................................................................................................................................FARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVGKDAGQTVPHVHIHILPR............................................................................................................................................................................................................................................................................................................................................... 106
8 -20.100[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)  ali follow..  7  409..............................................................................................................................................................................QELNCPWCGLDCLRLYALLKHLKLCHAR-GPVRRTSVTSLMVCRPRRQKTCLDEFLELDEDEISNQRSYITGHNRLYHHTETCLPVHPKELDIDSEG---------ESDPLWLR--IQMIDEFSDVNEGEKELMKQLPIACEMFLDAKGT--RKNLYRNF--------LHMGLIAAE---------------------TVYKTVQKLQGLLSKYAAGQELMQRQREEQLKYWLDVGMHKKQEDPKTLKSPQKPAPPADQASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKGTENGTNGSNSSSSNSKNVAKKSADQPLSTLANTRERRSEYGQKRNVSGSRLAATPASKRKLSSKDVEQAADAPEVLTHSDNAVDVGIIDDECGGFGAVGVMNGVASPVANNSEMDTEAEVEAEPTATKAITIHCQQPVTTPVAAAATANERLPGVAPHRRGPRRADRREEELVASAPGYRCRPSMRGADAGAAAAAAAAPTHPHPHRPP 949
9 -12.700[F] COG4360 ATP adenylyltransferase (5`,5```-P-1,P-4-tetraphosphate phosphorylase II)  ali follow..  10  13.............................................................................................................................................................................................DTLWQQVKKQTEYALNCGALLSIPTEFEFVEQDGVDFLVRILSNLTRKNADKKKRDKKSAGKEFNPFLPYEQDLFVADISDTHVCIFNKFNVVDYHLLIITRDFEEQEKLLTLADFTAMWACLAGIDGLA----------YNGGKIAGASQRHKHLQLVPLP.............................................................................................................................................................................................................................................................................................................................................. 165
10 -12.600[Z] KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain  ali follow..  9  44...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTNDRSAPVVGGGVVGERKSNTPKSFAAPPVPTGAPSLPTSSNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPSSYVLQQRPNRVDDHGRFHFKDDSYLPIPH 285
11 -12.200[LKR] KOG4594 Sequence-specific single-stranded-DNA-binding protein  ali follow..  12  1......................................................................................................................................................................................................................................................................................................................MYGKGKSNSSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN---GFLHSWWCVFWDLYCAAPERR------------------------------------------ETCEHSSEAKAFHDYSAAAAPSPVLGNIPPGDGMPVGPVPPGFFQPFMSPRYPGGPRPPLRIPNQALGGVPGSQPLLPRGMDPTRQQGHPNMGGPMQRMTPPRGMVPLGPQNYGGAMRPPLNALGGPGMPGMNMGPGGGRPWPNPTNANSIPYSSASPGNYVGPPGGGGPPGTPIMPSPADSTNSGDNMYTLMNAVPPGPNRPNFPMGPGSDGPMGGLGGMESHHMNGSLGSGDMDSISKNSPNNMSLSNQPGTPRDD 337
12 -11.600[R] KOG2893 Zn finger protein  ali follow..  10  3.....................................................................................................................................................................................................................................................................................................................................................................RKKKKWCWYCNRDFDDEKILIQHQKAK-------------------FKCHICHKKLYTGPGLAIHCMQVHKETPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPA 324
13 -11.200[O] KOG2231 Predicted E3 ubiquitin ligase  ali follow..  11  67.................................................................................................................................................................................VCYECSTRMRVLCQQNE---------RHVLSKVLFTLDKLPYRELEANNRSDLYSKK-----------------------------RIGFCTAEIR---RTFEGLRNH---VRSEHKLLYCDLCVETLNIFTFERRC------------------------TQAELQLHNTKGDPDNRSHR---H--EYCNKRYVDRDELFRHLRRE-------------------YFCHFCDADYNDYADLAEHFRAEHFLCEEGKCATEQFVGAFRNEIEYKAHVANVHGKSLNKQQAKQTRTLQVEITLGPRGRSGQTEQGITSVRTRNDEHNDYQNDLPSITQRHVSIDAGNEEQFPTLRGASTAPSVSLVRPPPPSMRNLSGTSGLARTKENFPALGGGNGGGVTGPTSSSIAARAAQSQHPVAAVFKKPTSAAGSGSRSGPPGNGMLLHVSNRSAAVPKKAATPQVDFPALPGKGNKKNLRNLEEDMLPSGSPVPMANISAKHRSLADDYVS 517
14 -11.100[KTDL] KOG2043 Signaling protein SWIFT and related BRCT domain proteins  ali follow..  10  105.......................................................................................................................................................................................................................................................................................................CLSQVSSEDRSALWALVTF-----------------YGGDCQLTLNKKCTHLIVPEPKGEKYECALDWDCVSEKTKKDEAFYHPRLIIYEEEEEEEEEEEEVENEEQDSQ--STDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSPEKQERNLNWTPAEVPQLAAAKRRLPQGKEPGLINLCANVPPVPGNILPPEVRGNLMAAGQNLQSSERSEMIATWSPAVRTLRNTNNADIQQMNRPSNVAHILQTLSAPTKNLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQLQPF 491
15 -10.700[K] KOG0709 CREB/ATF family transcription factor  ali follow..  8  250...................................................................................................................................................................................................................................................................KYPPLRLDEEEIKLCKKEGIC-------------LPDFFPLTKAEERDLKRIRKIRNKRSAQTSRKRKQDY---------IEQLEDRVSESTKENQALKQQERLSSENQSVISQLKKLQAQLGQNAKRTTQAGRCLAVFMLSACL-----QDNQKVLECIEEACQPSATSMNSANSAQRAPSGGPVMVSTNANRQMNRNAVLNHHNNSKYPASGNQNHHPIALEDLNHPPPTLQPKQSYQQQHQPSMYRRSDETIAKGSSTSSSSASSVASSTSTSSATSPIYRTSRTLGAFEDQCDASSDDSNCANMPSLVPMKMSAQPPKRKIVTMNGQPRVTYRAVPASSVNVEQAQYYKVPQQKVQYVTMDRPIKYEVLNDYIKMEEESTIRLPNSWSTAGPRLHPQVNASSRTVRPLTVATPGPSAKKIKT 685
16 -10.700[O] KOG0802 E3 ubiquitin ligase  ali follow..  9  311..............................................................................................................................................................................................................................................................................DAVLFLNIR-KGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAK-----AKRLHCN-HL------FHLGCL------------RSW-----------------LDQG---------------LNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQLERQNNPVHALATGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRVQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGRTGGLHLRTVSNTTNESLTNILAMAETVREVMPHVPDEIIFQVN............................................................................................ 586
17 -10.700[U] KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain  ali follow..  7  18..............................................................................................................................................................................................................................................................................HLHGVQENSPAQQADFIIIGHSRLNKENDTLKAKLEVFNMKTMRVREVEVVPSNMWGGQGLLGFCSFRRASEQVWHVLDVEPSSPALRPYTDYVVGSDQILQESEDFFTLIESH---------------EGKPLKLMVYNSKSDSCREVTVTPNAAWGGE----GIGYGYLHRIPTQPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQRVMDPGFLDVSGISLLDNSNASVWPSLPSSTELTTT---AVSTSGPEDICSSSSSHERGGEATWSGSEFEVSFLDSPGAQAQADHLPQLTLPDSLTSAASPEDGLSAELLEAQAEEEPASTEGLDTGTEAEGLDSQAQISTTE 440
18 -10.300[A] KOG1960 Predicted RNA-binding protein, contains KH domains  ali follow..  8  190............................................................................................................................................................................................................................................................................STCVYLGFEADPSSNVAARIRPN---QYINHIMNETGATVV-LRGRGSGSLENQHGDEAQL-------------LHLLLSGSN--PKSIDDAK--------------RLAENL----------------------------------MDTISVEFGASRVSSSKVYGAVPPPQQLISGAPGSDQENQNLISTYGLMTSIPITAPPYAVSSFPVTPATSLYPQFPVMQSLGISNGGPSQPVAGGTSYSGYAGIYPQATPLQQVAQVLKQSISPVISTVPPTMLTATSLSIPTMTGDVTPSAN-RVRSPPSPRSVMPPPPPKTIAPPPSKTMSPPSSKSMLPPPPRSKTMSPLSSKSMLPPPPRFTLTTQRSRLQDNHISVKKPNPVPDTLIKLMEYGDDEDDDDDPDEPLTTRS.... 537
19 -10.300[S] KOG4623 Uncharacterized conserved protein  ali follow..  8  34.........................................................................................................................................................................RSRYDARVNCWFCNGNVRVPYQDRNSWTEQYNGFTKDGDYNRDITSQRDCSLGSQKNSSKGSSSICANSYYSDVLTAQPPAPKNGLCDQCNEAQRLKVE-----KLSQFEPKNESRF-----QELKVYRERLEKQFRLCSSCERHVNKVLHEKKK---LSSKFLNYIIKGASLL-----KQPHFNRLAAAQKQFKLQRYRILMTILTVVNILCLLCRLPNATSIQFTTYL-ISFILVGSFVTLVLLATNRTNLLSQVNRDESACESFHRLCADECDDETLSMLSQQLSGYSDISNSNLSMRTASVCHSPAPTISQRTIQAPASLLSLDSLHLSKQRMEQQAWSSNYGDASTVVAPRVQPAMMFQQKPMRPLESQWYRHGQSNLAQGNTFTRSTQNLLMPSRLPSINRNVGGADVSAWVAANQSVNQDLCTANLMRHYEEKQQNQLSRTSSQSSGFESQPRPEAQCGTGAATSEARESQRNFAVFPPMPSPTPTITPSEYQYSRTALPQQQPTMQPG 662
20 -10.100[K] KOG3227 Calcium-responsive transcription coactivator  ali follow..  10  5...........................................................................................................................................................................................................................................................................................................................................................MSVAFAAPRQRGKGE---------ITPAAIQKMLDDNNHLIQCIMDSQNKG------KTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQ 329
21 -10.000[TZ] KOG4035 Coeffector of mDia Rho GTPase, regulates actin polymerization and cell adhesion turnover  ali follow..  9  1..................................................................................................................................................................................................................................................................................................................MLKALYD-------QAVYPKTISFDEG-----------FILYQTS------ARQRNWSMKGNIGFVP-SNYVMKIKVEHDFLISFLNSSIESLEKCTDHEINGIMSKDELLDRLREKKHTMERLYAESSERDGDSSLSYSHSYSDKGSHRHSHPHPTQSQTQLHSQHRQHSPPPSGGSVGSQRLDMSKKSMSSPAVGSSCGLPQNQGMIESPSMGSMQFQGSSCTIQTPQQQQPLPAPPAPAPSPSAASATPTAASTSKAATGGDVAQDNSITSEPSETTTTTTTTSEDVVTTYKETSQMSTSQQHKPQNGSTASASISASASASALRSNGGNGKANGSATALHQELQQEEADSAPDKSDDASAVQSDDGCPANGDSAD 361
22 -9.900[I] COG2134 CDP-diacylglycerol pyrophosphatase  ali follow..  8  52.....................................................................................................................................................................................................................................................................PCAEVKPRAGYVVFKD--RHGPLQYLLMPTYRINGTESLEPATPNFFWLAWQARGYMSKKYGHDPDSAVSLAINSR-SQDHLHIHIVREQLDNDLTRISTRWLPLRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVAEEIQDHSCA................................................................................................................................................................................................................................................................................... 246
23 -9.810[TU] KOG3895 Synaptic vesicle protein Synapsin  ali follow..  7  280.....................................................................................................................................................................................................................................................................RRETFFLSVHLQFQFTKFP------SVLKAGH-GGVATARLENQSALQDAAGLVSGAGNDSHCYCTIE--------PYIDSVHIQKIGNNY-SAMLEKYKSWVDEISELFMEVCGLSVVVAKDGRFALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQTGPGKLPSRSSVSSRAESPTDEGVAPTPPLPAGPRPAPMGGPPPIPERTSPAVGSIGRLSSRSSISEVPEEPSSSGPSTVGGEIANKKRGRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRPSEEPPAIPTTASSAVRPESSVSVSDSRNTDTLTERAGAGYQPVTNYEQQERVNPFDKEPSKSGSAASIHTSSSSSISSSSISSRINRNGNAIQSPPPPAGPPPPPPTNVTAVGSNANSSSGYRN 727
24 -9.250[O] KOG4275 Predicted E3 ubiquitin ligase  ali follow..  6  11.............................................................................................................................................................................................................................................................................................................................................................................................................TVFRRKRACFDCKRYY-KPKDLIFYLQSKHISTEGCLEKEELVGLVLTHVAQVDRSRGSNASSNSPGRGQANPIDSLKQSCQNFFSNLSDNISDSLASFDSKVTTKPPESRQPEVPTHIFEQPRVSTREIPTYASAVNGGPQHVHVQQQATTTNGGSQSSSSPSTSTQSSNNRDASSSSQAHVAHQEARNEEQEDAQSKSDCECSDEEIMATFSERVSISLKTDTSGRRVNAAAEPSPVDLANVDNGPAGNTAPSPGCSKPGSSSSKADASSQSSFEELGAIGGISDE 326
25 -9.230[R] KOG3253 Predicted alpha/beta hydrolase  ali follow..  9  187.............................................................................................................................................................................................................................................................................................ILIASSGPSSSVFPTSRRH-QCLEHMIGAVRSKVLEIHSHFPHKILIGWNTGALVAC----VVCLGFPLLTVDGPR--DMKTPVLFVAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMDEIVDTRAEGHMGSEPRDQDAEKKKKPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVLTHKQAQVPISSEPPEEGEKEDLRVQLKRHHPSSPLPGSKTSKRPKIKVSLISQGDTAGGPCAPSQGSAPEAAGGKPITMTLGQASAGAKELTGLLTTAKSSSSEGGVSASPVPSVVSSSTAPSALHTLQSRLVATSPGSSLPGATSASQDISSKTSGLPANPSPG 662
26 -9.180[Z] KOG1830 Wiskott Aldrich syndrome proteins  ali follow..  9  38.....................................................................................................................................................................................................................................................................................................IRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDR-----------IDRLAVKVTQLD-SLQDINMKKAFKS-DQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLK-EKMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSVYHGASSEGSLSPDTRSHASDVTDYSYPATPNHSLHPQPVTPSYAAGDVPPHGPASQAAEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEYYNPSGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEAKRQEPAQPPIS 438
27 -9.180[L] COG5055 Recombination DNA repair protein (RAD52 pathway)  ali follow..  8  21..........................................................................................................................................................................................................................................................................YSHEEFNFLQSSLTRK------LGPEYVSRRSGPGGFSVSYIEKAIELANEI-------------FGFNG--SIRSINV-----DFMDENKENGRISLGLSVIVRVTIKD-IDNCRGKASAFEKCKKEGTTDALKRALRCMYDKYYLREVGKMKPPTYHFDSGDLFRKTDPAARESFIKKQKTLNSTRTVNNQPLVNKGEQLAPRRAAELNDEQTREIEMYADEELDNIFVEDDIIAHLAVAEDTAHPAANNHHSEKAGTQINNKDKGSHNSAKPVQRSHTYPVAVPQNTSDSVGNAVTDTSPKTLFDPLKPNTGTPSPKFISARAAAAAEGVVSAPFTNNFNPRLDSPSIRKTSIIDHSKSLPSQTSPVSNNSMIRDSESIINERKENIGLIGVKRSLHDSTTSHNKSDLMRTNSDPQ 449
28 -9.180[L] KOG4141 DNA repair and recombination protein RAD52/RAD22  ali follow..  8  21..........................................................................................................................................................................................................................................................................YSHEEFNFLQSSLTRK------LGPEYVSRRSGPGGFSVSYIEKAIELANEI-------------FGFNG--SIRSINV-----DFMDENKENGRISLGLSVIVRVTIKD-IDNCRGKASAFEKCKKEGTTDALKRALRCMYDKYYLREVGKMKPPTYHFDSGDLFRKTDPAARESFIKKQKTLNSTRTVNNQPLVNKGEQLAPRRAAELNDEQTREIEMYADEELDNIFVEDDIIAHLAVAEDTAHPAANNHHSEKAGTQINNKDKGSHNSAKPVQRSHTYPVAVPQNTSDSVGNAVTDTSPKTLFDPLKPNTGTPSPKFISARAAAAAEGVVSAPFTNNFNPRLDSPSIRKTSIIDHSKSLPSQTSPVSNNSMIRDSESIINERKENIGLIGVKRSLHDSTTSHNKSDLMRTNSDPQ 449
29 -9.070[C] COG1085 Galactose-1-phosphate uridylyltransferase  ali follow..  10  91......................GTYVFNNDFAAGLSRVICFSPDHNKTLPELPVHKIRGVIETWNEQIEELGREYIWVQAFENKGETMGC----------------------------SQPHPHGQIWANSFLPNEIE------------------------------------------------RKEQHLKAYYQQY-----------------------------------------------GRNLLVDYVQAELKDGARTVVETEHWLAVVPYWAAWPFETLLLPKTHIRRMSELNDEQRDDLALAIKKLTSRYDNL--QCAFPYSMGWHFAPDINHWQLHAL-----YPPLLRSATIRKFMVGY-LTAEQAAERLRAVSDIHYKEQHNHQ................................................................................................................................................................................................................................................................................................. 372
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;