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Query: [S] KOG0997 Uncharacterized conserved protein Sand, from COG1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEVEQTSVRSDTNSTCEYLDAEGDPESPNLYQEADPDQEAEQQNHSIISELRDGLGTMRDNSALSPEPGQENKGLAASVESLALSTSTSAKTEDSIGGGLEEEYDYQHDSLWQGQKKHIFILSEAGKPIFSLHGNEDKLATLFGVIQALVSFVQMGQDAITSIHAGGIKFAFMQRSSLILVAASRSNMSVQQLQLQLGDVYNQILSILTYSHMTKIFERRKNFDLRRLLSGSERLFYNLLANDSSSAKVSNNIFTFLTNSIRVFPLPTTIRSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKKYSIHPADLRLIFNLVECSESFKSSENWSPICLPKFDMNGYLHAHVSYLADDCQACLLLLSVDRDAFFTLAEAKAKITEKLRKSHCLEAINEELQQPFNAKLYQQVVGIPELRHFLYKPKSTAQLLCPMLRHPYKSLTELERLEAIYCDLLHRIHNSSRPLKLIYEMKEREVVLAWATGTYELYAIFEPVVDKATVIKYVDKLIKWIEKEYDVYFIRNHATFLast
1 -128.000[S] KOG0997 Uncharacterized conserved protein Sand  ali  100  1MEVEQTSVRSDTNSTCEYLDAEGDPESPNLYQEADPDQEAEQQNHSIISELRDGLGTMRDNSALSPEPGQENKGLAASVESLALSTSTSAKTEDSIGGGLEEEYDYQHDSLWQGQKKHIFILSEAGKPIFSLHGNEDKLATLFGVIQALVSFVQMGQDAITSIHAGGIKFAFMQRSSLILVAASRSNMSVQQLQLQLGDVYNQILSILTYSHMTKIFERRKNFDLRRLLSGSERLFYNLLANDSSSAKVSNNIFTFLTNSIRVFPLPTTIRSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKKYSIHPADLRLIFNLVECSESFKSSENWSPICLPKFDMNGYLHAHVSYLADDCQACLLLLSVDRDAFFTLAEAKAKITEKLRKSHCLEAINEELQQPFNAKLYQQVVGIPELRHFLYKPKSTAQLLCPMLRHPYKSLTELERLEAIYCDLLHRIHNSSRPLKLIYEMKEREVVLAWATGTYELYAIFEPVVDKATVIKYVDKLIKWIEKEYDVYFIRNHATF 528
2 -17.300[V] KOG2622 Putative myrosinase precursor  ali follow..  2......................................................................................ESIANPLYFFSNLSLNPPSCSNVVRFIDVLEFFFVAHPLNRVMYPKGEQLERQTEITGFAEAVVNFTENDGFDFRTVTTQRTEHVYIRTEDDQFILGVDYPLFQPAIRSILSDAYKMFRMFFG--TFSSFIKNVPD------IPKFKERLDFFFSKYIPLLKVHKMPLLDHLGGVEFLRMSGPLYLNVVSLLSELREEFQVIEKIMFLYQDKLL------YYQLSKRDLPSLFHYLTTDAPLLGDESLSVVHLHSDQGT---YQMIVYRCLNATVCMFVRNCPANGGLEIRRDSESSQSSRATDQFLETELSQVASKIGDEIGDEKFPEAPDFHYIYFNPSSLSMTSSLSTSPKLPVAA-VDVNRLVCDTMSNFVSETEEFGECFVKSSSD-IVIKKVNSRLLVLIIPPSNYTSSLADVQSKTATIVRSHFEAIFFS..... 528
3 -14.700[U] KOG0934 Clathrin adaptor complex, small subunit  ali follow..  11  3....................................................................................................................HFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRY---------VELLDKYFGNVCELDIIFNFEKAYFILDEFII............................................................................................................................................................................................................................................................................................... 119
4 -14.600[U] KOG0935 Clathrin adaptor complex, small subunit  ali follow..  11  3....................................................................................................................RFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHNFVEFRNFKIIYRRYAGLYFCICVDVNDNKLAYLEGIHNF---------VEVLNEYFHNVCELDLVFNFYKVYTVVDEMFL............................................................................................................................................................................................................................................................................................... 119
5 -13.900[U] KOG0936 Clathrin adaptor complex, small subunit  ali follow..  15  3....................................................................................................................KAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVF---------VETLDKCFENVCELDLIFHVDKVHNILAEMVMG------VLETNMNEIVTQIDAQNKLEKSEAGLAGAPARAVSAVKN-------------MNLPEIPRNINIGDISIKVPNLPSFK.......................................................................................................................................................................................................... 193
6 -13.900[U] COG5030 Clathrin adaptor complex, small subunit  ali follow..  13  3....................................................................................................................YAVFIFNNKGKPRLTKFYTPIDESIQQKLIGDIYAAVSTRPPTACNLIAGKNRIIYRQYATLYFVFVVDEGESELGILDLIQVF---------VEALDRCFNNVCELDLVFKFQEIHAILAEVVS............................................................................................................................................................................................................................................................................................... 123
7 -12.000[U] KOG3343 Vesicle coat complex COPI, zeta subunit  ali follow..  10  14....................................................................................................................KAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKR--------ALLENMEGLFLAVDEIVDG------ILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQ................................................................................................................................................................................................................................................... 170
8 -10.600[O] COG5541 Vesicle coat complex COPI, zeta subunit  ali follow..  12  9....................................................................................................................NAFLILDSSGKRIFTKYYAPPHLKEGEGGVFNSVKEEKTFEKGLDILTYDGKLVVMLTVMDVIFYIVGGMEENEVMLYECLRSIRDALELLFKYVPDKR--------TLLENYDQLVIVVDETID............................................................................................................................................................................................................................................................................................... 134
9 -9.070[U] KOG3368 Transport protein particle (TRAPP) complex subunit  ali follow..  11  5.....................................................................................................................AFYIYSRKCECVFAHRDMEKLIFGVVFSLRNMVKKITADQDQFMSYTTSKYKLFYETPTNLRLIFITNPKIDS--LTHVLQQIYTTLYV--------EFVVKHPLYTHVPPSAEEGGINCEIFRI.............................................................................................................................................................................................................................................................................................. 143
10 -8.770[R] COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid  ali follow..  13  20....................................................................................................................KGSMVVGKDGLVIASQLPGNVDAELVGAMASAAFGAAERTSSEIGLIEGEHGKTLMVDAGEGILVVLTDAKVNLGLIRITMKRAADKIKAMF................................................................................................................................................................................................................................................................................................................................ 118

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.